Protein Alignment Secp43 and tra2b

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001006878.1
• Gene: tra2b / 448667
• XenbaseID: XB-GENE-5864557
• Length: 293
• Species: Xenopus tropicalis
• Alignment Length: 257
• Identity: 52/257 - (20%)
• Similarity: 85/257 - (33%)
• Gaps: 95/257 - (36%)

  Fly     5 HCQLWMGSLESYMTENFIIAAFRKMGEDP-TTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKL 68
            :|.|.:..|..|.||..:...|.|.|  | :.|.::.::.:....|:.||.|.:.|.|.:|..:.
 Frog   121 NCCLGVFGLSLYTTERDLREVFSKYG--PISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERA 183

  Fly    69 NGKPIPGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDL---SSDVDDYQLYKVFSSKFTSIKTA 130
            ||..:.|....|.|.:....:: ..||      :::|..   ||...||
 Frog   184 NGMELDGRRIRVDFSITKRPHT-PTPG------IYMGRPTYGSSRRRDY---------------- 225

  Fly   131 KVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGAVGEGNTN 195
                    :.:||.  |.|.:|.:    |....|.|
 Frog   226 --------YDRGYD--RGGYDDRE----YYSRSYRG----------------------------- 247

  Fly   196 YGYGSGMTAAGGTD---YSQYYDPTSTYWQGYQAWQGYYEQAGASITDAAAYYQQAMSQSHS 254
             |.|.|....||.|   :|:...|:..|.:|                   :|..::.|:|:|
 Frog   248 -GGGGGGGWRGGQDRDQFSRRRSPSPYYSRG-------------------SYRSRSRSRSYS 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	22/83 (27%)
		RRM2_SECp43_like	99..178	CDD:409781	13/81 (16%)
		Trnau1ap	210..330	CDD:465438	8/45 (18%)
tra2b	NP_001006878.1	RRM_TRA2	121..200	CDD:409798	23/80 (29%)