DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Secp43 and elavl2

DIOPT Version :9

Sequence 1:	NP_608837.2	Gene:	Secp43 / 33652	FlyBaseID:	FBgn0031607	Length:	336	Species:	Drosophila melanogaster
Sequence 2:	NP_001002172.2	Gene:	elavl2 / 431719	ZFINID:	ZDB-GENE-040704-9	Length:	389	Species:	Danio rerio

Alignment Length:	177	Identity:	55/177 - (31%)
Similarity:	93/177 - (52%)	Gaps:	18/177 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 LESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKPIPGTN 77
            |...||:..:.:.|..:|| ..:.:|:|:|.||:..||.|||::....|..|::.|||
Zfish    75 LPQNMTQEELKSLFGSIGE-IESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINTLNG------- 131

  Fly    78 PIVRFRLNSASNSYKLPGNE--REFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDSL-GF 139
              :|.:..:...||..|.:.  |:.:::|..|...:...:|.::| |:|..|.|:::::|.: |.
Zfish   132 --LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF-SQFGRIITSRILVDQVTGV 193

  Fly   140 SKGYGFVRFGIEDEQKSALYDMNGYIGLG-TKPI--KICNAVPKPKS 183
            |:|.||:||....|.:.|:..:||....| |:||  |..|. |..||
Zfish   194 SRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANN-PSQKS 239

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	22/76 (29%)
Secp43	NP_608837.2	RRM2_SECp43	99..180	CDD:241056	26/84 (31%)
elavl2	NP_001002172.2	ELAV_HUD_SF	65..388	CDD:273741	55/177 (31%)
		RRM1_Hu	67..144	CDD:241094	23/78 (29%)
		RRM2_HuB	149..238	CDD:241219	28/90 (31%)
		RRM_SF	303..388	CDD:302621
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D775799at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920