Protein Alignment Secp43 and bol

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001261614.1
• Gene: bol / 39049
• FlyBaseID: FBgn0011206
• Length: 233
• Species: Drosophila melanogaster
• Alignment Length: 242
• Identity: 65/242 - (26%)
• Similarity: 96/242 - (39%)
• Gaps: 55/242 - (22%)

  Fly    65 MHKLNGKPIPGTNPIVRFRLNSASNSY--KLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSI 127
            |||:...|.|...|........|:..|  .:|..     ::||.:|.|..:..|.:|||: :.::
  Fly     1 MHKIAAAPPPSATPGGGLETPLAAPKYGTLIPNR-----IFVGGISGDTTEADLTRVFSA-YGTV 59

  Fly   128 KTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNG-YIGLGTKPIKICNAVPKPKSEL------ 185
            |:.|:|:|..|.|||||||.|  |.||::.....:| .:.|..:.:.|..|:.|..:.|
  Fly    60 KSTKIIVDRAGVSKGYGFVTF--ETEQEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVAT 122

  Fly   186 GGAVGEGNTN----------------YGYGSGMTAAGGTDYSQYYDPTSTYWQG-YQ-------- 225
            .|||....|.                |...:..||||   ....|.|::..:|. ||
  Fly   123 NGAVYYTTTPPAPISNIPMDQFAAAVYPPVTDFTAAG---VPAIYPPSAMQYQPFYQYYSVPMNV 184

  Fly   226 --AW-QGYYEQAGASITDAAAYYQQAMSQSHSNPQTLAQHAEAWSAQ 269
              .| |.|.|.....:....:......||||  ||     :..||.:
  Fly   185 PTIWPQNYQENHSPLLHSPTSNPHSPHSQSH--PQ-----SPCWSIE 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	7/24 (29%)
		RRM2_SECp43_like	99..178	CDD:409781	27/79 (34%)
		Trnau1ap	210..330	CDD:465438	17/72 (24%)
bol	NP_001261614.1	RRM_DAZL_BOULE	31..111	CDD:409846	29/87 (33%)
		PABP-1234	<45..219	CDD:130689	50/186 (27%)