Protein Alignment Secp43 and SLIRP1

DIOPT Version :9

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001027083.1
• Gene: SLIRP1 / 3772560
• FlyBaseID: FBgn0064117
• Length: 90
• Species: Drosophila melanogaster
• Alignment Length: 65
• Identity: 26/65 - (40%)
• Similarity: 34/65 - (52%)
• Gaps: 9/65 - (13%)

  Fly   102 VWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDS-LGFSKGYGFVRFG-------IEDEQKSAL 158
            ::||:|...|...:|...| .:|..:.:|.||.|. .|.|||||||.|.       ||:|||..|
  Fly    17 IFVGNLPWTVGHQELRGYF-REFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHIL 80

  Fly   159  158
              Fly    81  80

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054
		RRM2_SECp43	99..180	CDD:241056	26/65 (40%)
SLIRP1	NP_001027083.1	RRM_SLIRP	16..88	CDD:409688	26/65 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463926
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930