Protein Alignment Secp43 and tia1l

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_956476.1
• Gene: tia1l / 323447
• ZFINID: ZDB-GENE-030131-2167
• Length: 342
• Species: Danio rerio
• Alignment Length: 344
• Identity: 86/344 - (25%)
• Similarity: 140/344 - (40%)
• Gaps: 85/344 - (24%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGEDP-TTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGK 71
            |::|:|...:||..|:..|.::|  | .:.:::.:....:|  ||||.|..:.||..|:..:||:
Zfish    11 LYVGNLSRDVTEALILQVFSQIG--PCKSCKMILDTTGNDP--YCFVEFYENRHAAAALAAMNGR 71

  Fly    72 PIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAK 131
            .|.|.:    .::|.||.    |.::::     |.|:|||||.::....:...| :.|..|..|:
Zfish    72 KILGKD----MKVNWAST----PSSQKKDTSNHFHVFVGDLSPEISTDDVRAAF-APFGKISDAR 127

  Fly   132 VILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGAVGEGNTN 195
            |:.| :.|.||||||:.|..:.:.:||:..|||. .||.:.|:...|..||.:......|..:.:
Zfish   128 VVKDLATGKSKGYGFISFINKWDAESAIQQMNGQ-WLGGRQIRTNWATRKPSAPKSNNEGASSKH 191

  Fly   196 YGYGS--------------GMTAAGGTD--YSQYYDPTSTYWQ-------GY-----QAWQG--- 229
            ..|..              |..|:|.:|  ..|.:.|.....:       ||     .:.:|
Zfish   192 LSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAH 256

  Fly   230 -----------------YYEQAGASI--------------TDAAAYYQQAMSQSHSNPQTLAQHA 263
                             |:.:..|.:              |.||..|.| ..||:.|.|.:.|:.
Zfish   257 AIVSVNGTCIEGHTVKCYWGKETADMRSMQQMPMPQQNKPTYAAQPYGQ-WGQSYGNGQQMGQYV 320

  Fly   264 -EAWSAQRSAQYEQQQQQQ 281
             ..|.......|.|...||
Zfish   321 PNGWQMPTYGVYGQAWNQQ 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	25/82 (30%)
		RRM2_SECp43_like	99..178	CDD:409781	29/84 (35%)
		Trnau1ap	210..330	CDD:465438	22/119 (18%)
tia1l	NP_956476.1	RRM_SF	10..83	CDD:473069	23/79 (29%)
		RRM2_TIA1_like	98..172	CDD:409789	28/75 (37%)
		RRM3_TIAR	206..278	CDD:241064	10/71 (14%)