Sequence 1: | NP_608837.2 | Gene: | Secp43 / 33652 | FlyBaseID: | FBgn0031607 | Length: | 336 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956476.1 | Gene: | tia1l / 323447 | ZFINID: | ZDB-GENE-030131-2167 | Length: | 342 | Species: | Danio rerio |
Alignment Length: | 344 | Identity: | 86/344 - (25%) |
---|---|---|---|
Similarity: | 140/344 - (40%) | Gaps: | 85/344 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 LWMGSLESYMTENFIIAAFRKMGEDP-TTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGK 71
Fly 72 PIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAK 131
Fly 132 VILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGAVGEGNTN 195
Fly 196 YGYGS--------------GMTAAGGTD--YSQYYDPTSTYWQ-------GY-----QAWQG--- 229
Fly 230 -----------------YYEQAGASI--------------TDAAAYYQQAMSQSHSNPQTLAQHA 263
Fly 264 -EAWSAQRSAQYEQQQQQQ 281 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Secp43 | NP_608837.2 | RRM1_SECp43 | 7..90 | CDD:241054 | 25/82 (30%) |
RRM2_SECp43 | 99..180 | CDD:241056 | 30/86 (35%) | ||
tia1l | NP_956476.1 | ELAV_HUD_SF | 7..272 | CDD:273741 | 69/274 (25%) |
RRM_SF | 10..90 | CDD:302621 | 26/90 (29%) | ||
RRM2_TIA1 | 96..175 | CDD:241062 | 30/80 (38%) | ||
RRM3_TIAR | 206..278 | CDD:241064 | 10/71 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1842 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |