Protein Alignment Secp43 and Tia1

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_063142135.1
• Gene: Tia1 / 312510
• RGDID: 1305742
• Length: 398
• Species: Rattus norvegicus
• Alignment Length: 343
• Identity: 86/343 - (25%)
• Similarity: 130/343 - (37%)
• Gaps: 77/343 - (22%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKP 72
            |::|:|...:||..|:..|.::|.......:|......:|  ||||.|....||..|:..:||:.
  Rat     9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDQTAGNDP--YCFVEFHEHRHAAAALAAMNGRK 71

  Fly    73 IPG--------TNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKT 129
            |.|        |.|..:.:..|:|.......::..|.|:|||||.::....:...| :.|..|..
  Rat    72 IMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF-APFGRISD 135

  Fly   130 AKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAV---PKPKS------- 183
            |:|:.| :.|.|||||||.|..:.:.::|:..|.|. .||.:.|:...|.   |.|||
  Rat   136 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ-WLGGRQIRTNWATRKPPAPKSTYESNTK 199

  Fly   184 -----ELGGAVGEGNTNYGYGSGMTAAGGTD--YSQYYDPTSTYWQ-------GYQAWQ-GYYEQ 233
                 |:......||... |..|:| :|.|:  ..|.:.|.....:       ||...: ..:|.
  Rat   200 QLSYDEVVSQSSPGNCTV-YCGGVT-SGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHES 262

  Fly   234 AGASITDA----------------------------------AAYYQQAMSQSHSNPQTLAQHA- 263
            |..:|...                                  .||.|  ..|.:.|.|.:.|:.
  Rat   263 AAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPAYGQ--WGQWYGNAQQIGQYVP 325

  Fly   264 EAWSAQRSAQYEQQQQQQ 281
            ..|.......|.|...||
  Rat   326 NGWQVPAYGMYGQPWSQQ 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	26/89 (29%)
		RRM2_SECp43_like	99..178	CDD:409781	28/79 (35%)
		Trnau1ap	210..330	CDD:465438	19/115 (17%)
Tia1	XP_063142135.1	None