DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Secp43 and Rbm34

DIOPT Version :9

Sequence 1:	NP_608837.2	Gene:	Secp43 / 33652	FlyBaseID:	FBgn0031607	Length:	336	Species:	Drosophila melanogaster
Sequence 2:	NP_001014037.1	Gene:	Rbm34 / 307956	RGDID:	1310161	Length:	428	Species:	Rattus norvegicus

Alignment Length:	132	Identity:	37/132 - (28%)
Similarity:	63/132 - (47%)	Gaps:	12/132 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    52 FVNFISDDHALDAMHKLNGKPIPGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQL 116
            :|.|..:..|..|:.: ||..|...   .|.|::.||.:    .:..:.||:||:|...||:..|
  Rat   245 YVVFKEERAAAKALQR-NGAQIAEG---FRIRVDLASET----ASRDKRSVFVGNLPYRVDESAL 301

  Fly   117 YKVFSSKFTSIKTAKVILDSL-GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
            .:.|.. ..||...:::.:.| |..:|:|:|.|...|....|| .:|....:|.| :::..:|.|
  Rat   302 EEHFLD-CGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KLNNSELMGRK-LRVMRSVNK 363

  Fly   181 PK 182
            .|
  Rat   364 EK 365

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	11/37 (30%)
Secp43	NP_608837.2	RRM2_SECp43	99..180	CDD:241056	24/81 (30%)
Rbm34	NP_001014037.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..106
		RRM	73..364	CDD:223796	35/129 (27%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	127..152
		RRM1_RBM34	183..274	CDD:240840	9/32 (28%)
		RRM2_RBM34	286..358	CDD:240841	23/74 (31%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	361..428		3/5 (60%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910