Protein Alignment Secp43 and Rbm31y

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001395831.1
• Gene: Rbm31y / 302780
• RGDID: 1562219
• Length: 565
• Species: Rattus norvegicus
• Alignment Length: 308
• Identity: 62/308 - (20%)
• Similarity: 115/308 - (37%)
• Gaps: 84/308 - (27%)

  Fly     7 QLWMGSLESYMTENFIIAAFRKMGE--------DPTTVRLMRNKYTGEPAGYCFVNFISDDHALD 63
            ::::|.|...:.:..::....|.||        ||.         ||...|:.||.| .|...::
  Rat    34 KMFIGGLSQELNKQVLLEYLSKFGEIIDFIIKIDPN---------TGLSRGFGFVLF-KDSSTVE 88

  Fly    64 AM-----HKLNGKPIPGTNPIVRFRLNSASNSYKLPGNEREF---SVWVGDLSSDVDDYQLYKVF 120
            .:     ||::||.|       .|:...|.        |.:|   .|:||.|:..:.:.::...|
  Rat    89 KVLRVKDHKVDGKKI-------EFKRAKAL--------ESQFPIKKVFVGGLNPRMSEEKIRAYF 138

  Fly   121 SSKFTSIKTAKVILDS-LGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK---- 180
            .: |..|:..::.|.| ....:.:||:::..|:..:..|.....:||.....:|:  |.||
  Rat   139 GT-FGQIEAIELPLCSDTQERRAFGFIKYMDENPVRKVLETRYHFIGSSRCEVKM--AFPKEYPA 200

  Fly   181 ------------------PKSELGGAVGEGNTNYGYGSGMTAAGGTDYSQYYDPTSTYWQGYQAW 227
                              |.:||        .|:..|      ||:......|.:.|......|.
  Rat   201 RQLSKSKTRAKDRARTAVPAAEL--------ENHWRG------GGSQNFHIMDNSDTQEANQDAH 251

  Fly   228 Q--GYYEQAGASIT-DAAAYYQQAMSQSHSNPQTLAQHAEAWSAQRSA 272
            :  .|..:|.:.:| ..|..::...:...:||..:..::.|:.|.|:|
  Rat   252 RAGSYTSRANSDVTLSNARGFRDTPNAFQANPNVIVTNSSAFRASRTA 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	21/95 (22%)
		RRM2_SECp43_like	99..178	CDD:409781	17/82 (21%)
		Trnau1ap	210..330	CDD:465438	13/66 (20%)
Rbm31y	NP_001395831.1	RRM_SF	34..109	CDD:473069	20/91 (22%)
		RRM_SF	116..193	CDD:473069	16/79 (20%)