Protein Alignment Secp43 and Hnrnpa1

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001386203.1
• Gene: Hnrnpa1 / 29578
• RGDID: 69234
• Length: 373
• Species: Rattus norvegicus
• Alignment Length: 274
• Identity: 59/274 - (21%)
• Similarity: 108/274 - (39%)
• Gaps: 37/274 - (13%)

  Fly     7 QLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAM----HK 67
            :|::|.|....|:..:.:.|.:.| ..|...:||:..|....|:.||.:.:.:....||    ||
  Rat    15 KLFIGGLSFETTDESLRSHFEQWG-TLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHK 78

  Fly    68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNEREF-SVWVGDLSSDVDDYQLYKVFSSKFTSIKTAK 131
            ::|:.:.....:.|       ...:.||..... .::||.:..|.:::.|...| .::..|:..:
  Rat    79 VDGRVVEPKRAVSR-------EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF-EQYGKIEVIE 135

  Fly   132 VILD-SLGFSKGYGFVRFGIEDE------QKSALYDMNGY-----IGLGTKPIKICNAVPKPKS- 183
            ::.| ..|..:|:.||.|...|.      ||  .:.:||:     ..|..:.:...::..:.:|
  Rat   136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK--YHTVNGHNCEVRKALSKQEMASASSSQRGRSG 198

  Fly   184 --ELGGAVG---EGNTNYGYGSGMTAAGGTDYSQYYDPTSTYWQGYQAW--QGYYEQAGASITDA 241
              ..||..|   .||.|:|.|...:..||...|:..........||..:  .|.|...|...:..
  Rat   199 SGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGG 263

  Fly   242 AAYYQQAMSQSHSN 255
            :..|... .|.:.|
  Rat   264 SRGYGSG-GQGYGN 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	19/86 (22%)
		RRM2_SECp43_like	99..178	CDD:409781	18/91 (20%)
		Trnau1ap	210..330	CDD:465438	9/48 (19%)
Hnrnpa1	NP_001386203.1	RRM1_hnRNPA1	12..92	CDD:410154	18/77 (23%)
		RRM2_hnRNPA3	105..184	CDD:409996	18/81 (22%)
		HnRNPA1	313..345	CDD:463312