DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Secp43 and Elavl2

DIOPT Version :9

Sequence 1:	NP_608837.2	Gene:	Secp43 / 33652	FlyBaseID:	FBgn0031607	Length:	336	Species:	Drosophila melanogaster
Sequence 2:	NP_001289146.1	Gene:	Elavl2 / 286973	RGDID:	628611	Length:	388	Species:	Rattus norvegicus

Alignment Length:	166	Identity:	50/166 - (30%)
Similarity:	89/166 - (53%)	Gaps:	15/166 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 LESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKPIPGTN 77
            |...||:..:.:.|..:|| ..:.:|:|:|.||:..||.|||:|....|..|::.|||
  Rat    75 LPQNMTQEELKSLFGSIGE-IESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG------- 131

  Fly    78 PIVRFRLNSASNSYKLPGNE--REFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDSL-GF 139
              :|.:..:...||..|.:.  |:.:::|..|...:...:|.::| |::..|.|:::::|.: |.
  Rat   132 --LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGI 193

  Fly   140 SKGYGFVRFGIEDEQKSALYDMNGYIGLG-TKPIKI 174
            |:|.||:||....|.:.|:..:||....| |:||.:
  Rat   194 SRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 229

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	23/76 (30%)
Secp43	NP_608837.2	RRM2_SECp43	99..180	CDD:241056	23/78 (29%)
Elavl2	NP_001289146.1	ELAV_HUD_SF	65..387	CDD:273741	50/166 (30%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D775799at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920