Protein Alignment Secp43 and usp109

DIOPT Version :9

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_596836.2
• Gene: usp109 / 2540117
• PomBaseID: SPBC1289.12
• Length: 365
• Species: Schizosaccharomyces pombe
• Alignment Length: 273
• Identity: 56/273 - (20%)
• Similarity: 111/273 - (40%)
• Gaps: 55/273 - (20%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKP 72
            ||:.:||.:|.|::|.|.|    |:...|....:..:|.....|.:.|.|.|.|.:|:.:.:.:.
pombe     5 LWLNNLEEWMNEDYIRAIF----ENVRKVNYYEDGESGAILKTCCIEFESQDAARNALERQSTQR 65

  Fly    73 IPGTNPIVRFRLNSASN----SYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVI 133
            :...|||   .|:....    ||        :.:::.::..:|.:..:..:| .::..| :|:|:
pombe    66 LISGNPI---SLDVVPEWQKPSY--------YMLFISNIDPEVSENDIKYLF-QRYNFI-SARVL 117

  Fly   134 LDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGAVGEGNTNYGY 198
            ....|.|....|:....|.:.::|..:|.|...|  |...:.::|...|:....:.|      .|
pombe   118 RCVDGTSTSIAFIWLANESDIQNAQVEMQGAFCL--KRSILVHSVKSDKNTYLSSPG------FY 174

  Fly   199 GSGMTAAGGTDYSQYYDPTSTYWQGY--------QAWQGYYEQAG-----------ASITDAAAY 244
            |:..      ..:|:.||.:|....:        |..:.|:...|           ..|..|..|
pombe   175 GTPQ------PLNQFTDPNNTAVYVHQLPENITTQELRSYFLHFGEILYTQVNNNSGRIVFAQRY 233

  Fly   245 Y-QQAMSQSHSNP 256
            : :||:::.::.|
pombe   234 FAEQAINEMNNFP 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	22/85 (26%)
		RRM2_SECp43	99..180	CDD:241056	15/80 (19%)
usp109	NP_596836.2	RRM_SF	5..>58	CDD:302621	17/56 (30%)
		RRM	8..285	CDD:223796	54/270 (20%)
		RRM_SF	88..158	CDD:240668	14/73 (19%)
		RRM_SF	188..256	CDD:302621	10/59 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR47640
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100