Protein Alignment Secp43 and Sfpq

DIOPT Version :9

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001020442.1
• Gene: Sfpq / 252855
• RGDID: 727923
• Length: 699
• Species: Rattus norvegicus
• Alignment Length: 345
• Identity: 74/345 - (21%)
• Similarity: 128/345 - (37%)
• Gaps: 91/345 - (26%)

  Fly     6 CQLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNG 70
            |:|::|:|.:.:||:.....|.|.|| |..|.:.:.|      |:.|:...|...|..|..:|:.
  Rat   289 CRLFVGNLPADITEDEFKRLFAKYGE-PGEVFINKGK------GFGFIKLESRALAEIAKAELDD 346

  Fly    71 KPIPGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILD 135
            .|:.|....|||..::|:.|             |.:||..|.:..|.:.| |:|..|:.|.||:|
  Rat   347 TPMRGRQLRVRFATHAAALS-------------VRNLSPYVSNELLEEAF-SQFGPIERAVVIVD 397

  Fly   136 SLGFSKGYGFVRFGIEDEQKSALYDMN-GYIGLGTKPIKICNAVPKPKSELGGAVGEGNTNYGYG 199
            ..|.|.|.|.|.|..:...:.|....: |...|.|.|..:   :.:|..:|....|
  Rat   398 DRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPV---IVEPLEQLDDEDG--------- 450

  Fly   200 SGMTAAGGTDYSQYYDPTSTYWQGYQAWQGYYEQAGASITDAAAYYQQAMSQSHSNPQTLAQH-- 262
                                                  :.:..|.......:....|...|||
  Rat   451 --------------------------------------LPEKLAQKNPMYQKERETPPRFAQHGT 477

  Fly   263 -----AEAWSAQRSAQYEQQQQQQTASAANGAED------ENGLVEHKF-VLDVDKLNREAIDAD 315
                 ::.|.:  ..:.|:||::|.......|:|      |:...||:. :|..|.:.|:   .:
  Rat   478 FEYEYSQRWKS--LDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQ---EE 537

  Fly   316 RRLYDALESSKWLPIEQLEV 335
            .|..:.|.|.:....:::::
  Rat   538 LRRMEELHSQEMQKRKEMQL 557

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	24/82 (29%)
		RRM2_SECp43	99..180	CDD:241056	24/81 (30%)
Sfpq	NP_001020442.1	RRM1_PSF	288..358	CDD:410000	22/75 (29%)
		RRM2_PSF	364..443	CDD:410003	26/95 (27%)
		NOPS_PSF	434..530	CDD:240583	20/147 (14%)
		PRK12704	478..>586	CDD:237177	16/85 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000