DRSC/TRiP Functional Genomics Resources

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Protein Alignment Secp43 and Tial1

DIOPT Version :9

Sequence 1:NP_608837.2 Gene:Secp43 / 33652 FlyBaseID:FBgn0031607 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_033409.1 Gene:Tial1 / 21843 MGIID:107913 Length:392 Species:Mus musculus


Alignment Length:373 Identity:97/373 - (26%)
Similarity:138/373 - (36%) Gaps:100/373 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWMGSLESYMTENFIIAAFRKMG---------EDPTTVRLMRNKYTG---------EPAGYCFVN 54
            |::|:|...:||..|:..|.::|         |.|.:.|:  |...|         :|  ||||.
Mouse    11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRV--NSSVGFSVLQHTSNDP--YCFVE 71

  Fly    55 FISDDHALDAMHKLNGKPIPGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKV 119
            |.....|..|:..:||:.|.|....|.:....:|..   ......|.|:|||||.::....:...
Mouse    72 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK
---KDTSNHFHVFVGDLSPEITTEDIKSA 133

  Fly   120 FSSKFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAV---PK 180
            | :.|..|..|:|:.| :.|.|||||||.|..:.:.::|:..|.|. .||.:.|:...|.   |.
Mouse   134 F-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQ-WLGGRQIRTNWATRKPPA 196

  Fly   181 PKSELGGAVGEGNT---------------NYGYGSGMTAAGGTD--YSQYYDPTSTYWQ------ 222
            |||     ..|.||               |.....|..|:|.||  ..|.:.|.....:      
Mouse   197 PKS-----TQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE 256

  Fly   223 -GYQAWQ-GYYEQAGASIT---------------------DAAAYYQQA-------MSQSHSNPQ 257
             ||...: ..:|.|..:|.                     |....:||.       .||.:.|||
Mouse   257 KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQ 321

  Fly   258 TLAQH-AEAWSAQRSAQYEQQQQQ------QTASAA----NGAEDENG 294
            ...|: |..|.......|.|...|      |:.|||    .||:...|
Mouse   322 QYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMGGFGAQPPQG 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Secp43NP_608837.2 RRM1_SECp43 7..90 CDD:241054 27/99 (27%)
RRM2_SECp43 99..180 CDD:241056 29/84 (35%)
Tial1NP_033409.1 RRM1_TIAR 10..107 CDD:410028 27/99 (27%)
RRM2_TIAR 113..192 CDD:410029 29/80 (36%)
RRM3_TIAR 222..294 CDD:241064 12/71 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 363..392 3/7 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1842
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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