DRSC/TRiP Functional Genomics Resources

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Protein Alignment Secp43 and T07F10.3

DIOPT Version :9

Sequence 1:NP_608837.2 Gene:Secp43 / 33652 FlyBaseID:FBgn0031607 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_506222.2 Gene:T07F10.3 / 179765 WormBaseID:WBGene00011589 Length:371 Species:Caenorhabditis elegans


Alignment Length:354 Identity:94/354 - (26%)
Similarity:141/354 - (39%) Gaps:107/354 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKP 72
            ||:|.:.:..||..:...|.:.|..|..|:.:..|  .|..||||:.||:.|.|...::.|||..
 Worm    70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVK--DELKGYCFIEFITFDEARQTLYDLNGNR 132

  Fly    73 IPGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDSL 137
            |||...| ||.|..|::||. |.:  ||::.|..:..|:.|.:||::| .|:.|.:.||:.....
 Worm   133 IPGFKDI-RFNLCFANDS
YN-PNS--EFNLHVSSVPDDMADAELYRIF-DKYQSCRGAKMFRFVD 192

  Fly   138 GFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGAVGEGNTNYGYGSGM 202
            |.|||.||||||.:.:|:.||.:|:     .|| :..|..:.|    |.|:.||           
 Worm   193 GSSKGSGFVRFGNQTDQQMALVEMH-----RTK-VGGCRIILK----LAGSRGE----------- 236

  Fly   203 TAAGGTDYSQYYDPTSTYWQGYQAWQGYYEQAGASITDAAAYYQQAMSQSHSNPQTLAQHAEAWS 267
                                                         .:.:..|. |..:|..:...
 Worm   237 ---------------------------------------------RLDRGESR-QFKSQRNDRRR 255

  Fly   268 AQRSAQYEQ----QQQQQTASAANG----AEDEN--GLVEHKF-----------VLDVDKL---- 307
            .::|.||..    .||.|...|...    ..|:|  | .:|.:           ::.:|.|    
 Worm   256 DEKSGQYRNGTAVPQQTQVYDAYGNPVVVPVDKNIYG-TDHPWGPFPDDPDLDSIIGLDLLTTKY 319

  Fly   308 ------NREAIDADRRLYDALESSKWLPI 330
                  .|..||.|:.:.| ||||:|..|
 Worm   320 RPQIANKRLMIDTDQFMLD-LESSRWSSI 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Secp43NP_608837.2 RRM1_SECp43 7..90 CDD:241054 30/81 (37%)
RRM2_SECp43 99..180 CDD:241056 29/80 (36%)
T07F10.3NP_506222.2 RRM1_SECp43_like 69..149 CDD:240790 30/81 (37%)
RRM_SF 155..234 CDD:302621 32/89 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159940
Domainoid 1 1.000 48 1.000 Domainoid score I8064
eggNOG 1 0.900 - - E33208_3BEHN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001306
OrthoInspector 1 1.000 - - oto17241
orthoMCL 1 0.900 - - OOG6_102296
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1842
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.630

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