Protein Alignment Secp43 and tiar-2

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_496718.1
• Gene: tiar-2 / 174909
• WormBaseID: WBGene00012904
• Length: 434
• Species: Caenorhabditis elegans
• Alignment Length: 407
• Identity: 79/407 - (19%)
• Similarity: 126/407 - (30%)
• Gaps: 192/407 - (47%)

  Fly     8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNK--YTGEPAGYCFVNFISDDHALDAMHKLNG 70
            |::.:|:..:|:.|:...|.::|      .:|:.|  :.|....|.||.|...:.|..|:...||
 Worm    42 LFVANLDPAITDEFLATLFNQIG------AVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNG 100

  Fly    71 KPI---------------PGTNPIVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVF 120
            :.:               ||.|             ...|...|.|.|:||||.|::|..:|.:.|
 Worm   101 RELLEKEMHVTWAFEPREPGEN-------------RSKPETSRHFHVFVGDLCSEIDSTKLREAF 152

  Fly   121 SSKFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKP--- 181
             .||..:..||:|.| :....||||||.:...::.:.|:.:||| ..||.:.|:...|..||
 Worm   153 -VKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG-AWLGRRTIRTNWATRKPDED 215

  Fly   182 ----------------------------------------------------------------- 181
                                                                             
 Worm   216 GERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIANLGEDEIRRAFDRFGP 280

  Fly   182 -------------------------------KSELGGAV---------------------GEGNT 194
                                           .:::||.:                     |.|:.
 Worm   281 INEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKSGDSGKPSERGSGGGGGSG 345

  Fly   195 NYGYGSGMTAAGG----------TDYSQYYDPT-------------STYWQGY----------QA 226
            |||||.|.:..||          ::::|...|:             :.|||.|          |.
 Worm   346 NYGYGYGNSGGGGGSGGPGNSQFSNFNQRPPPSGNGGSGGGSGGQNNQYWQYYSQYYNNPHLMQQ 410

  Fly   227 WQGYYEQAGASITDAAA 243
            |..|:::.|.....|||
 Worm   411 WNNYWQKDGPPPPPAAA 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	20/98 (20%)
		RRM2_SECp43_like	99..178	CDD:409781	29/79 (37%)
		Trnau1ap	210..330	CDD:465438	13/57 (23%)
tiar-2	NP_496718.1	PABP-1234	41..>317	CDD:130689	54/295 (18%)
		RRM_SF	133..207	CDD:473069	28/75 (37%)
		RRM3_TIA1_like	256..325	CDD:409790	2/68 (3%)