Protein Alignment Secp43 and daz-1

DIOPT Version :10

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_495036.3
• Gene: daz-1 / 173931
• WormBaseID: WBGene00000935
• Length: 498
• Species: Caenorhabditis elegans
• Alignment Length: 246
• Identity: 60/246 - (24%)
• Similarity: 94/246 - (38%)
• Gaps: 62/246 - (25%)

  Fly    73 IPGTNPIVRFRLNSAS-----NSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKV 132
            :|.| ||..:...:|:     .:|:|..|.    ::||...:...:.:|.:.| .||.::|..|:
 Worm    39 LPST-PIQLYPTGAAALIPAPPTYELIPNR----IFVGGFPTSTTETELREHF-EKFFAVKDVKM 97

  Fly   133 ILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKP------KSELGGAVGE 191
            :....|.||||||:.|..||:.:                 :|....||.      |..||.|:.:
 Worm    98 VKSLDGQSKGYGFITFETEDQAE-----------------EIRKLTPKQLEFRSRKLNLGPAIRK 145

  Fly   192 GNTN-----YGYG--SGMTAAGGTDYSQYYDPTSTYWQGYQAWQGYYEQAGASITDAAAYYQQAM 249
            .|:|     |...  |.:.||....:| |..|.|.     ..:.||...|...:........|..
 Worm   146 INSNSFQPSYAIATPSQLVAASPGPFS-YAIPASP-----SPYSGYSYPASPQMFVYPPLRSQDQ 204

  Fly   250 SQSHSNPQTLAQHAEAWSAQRSAQYEQQQQ----------QQTASAANGAE 290
            |:..|..||..|::..     :.|::|..|          :..|||..|.|
 Worm   205 SRQQSEQQTTPQNSPT-----NLQHQQSPQVFFGGDQDPIRSYASAVAGVE 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	5/21 (24%)
		RRM2_SECp43_like	99..178	CDD:409781	19/78 (24%)
		Trnau1ap	210..330	CDD:465438	21/91 (23%)
daz-1	NP_495036.3	RRM_DAZL_BOULE	64..145	CDD:409846	26/102 (25%)
		PABP-1234	<66..265	CDD:130689	53/218 (24%)