DRSC/TRiP Functional Genomics Resources

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Protein Alignment Secp43 and DAZL

DIOPT Version :9

Sequence 1:NP_608837.2 Gene:Secp43 / 33652 FlyBaseID:FBgn0031607 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001177740.1 Gene:DAZL / 1618 HGNCID:2685 Length:315 Species:Homo sapiens


Alignment Length:168 Identity:42/168 - (25%)
Similarity:64/168 - (38%) Gaps:47/168 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 SASNSYKLP-GNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFG 149
            :.|..|.|| |.....:|:||.:...:|:.:: :.|.:::.|:|..|:|.|..|.|||||||.|.
Human    45 ATSQGYILPEGKIMPNTVFVGGIDVRMDETEI-RSFFARYGSVKEVKIITDRTGVSKGYGFVSFF 108

  Fly   150 IE-DEQKSALYDMNGYIGLGTKPIKICNAVPK------------------PKSELGGAVGEGNTN 195
            .: |.||.    :...|....|.:|:..|:.|                  |..:........|| 
Human   109 NDVDVQKI----VESQINFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWTNPNT- 168

  Fly   196 YGYGSGMTAAGGTDYSQYYDPTST------YWQGYQAW 227
                           ..|..||:|      |.|.|..:
Human   169 ---------------ETYMQPTTTMNPITQYVQAYPTY 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Secp43NP_608837.2 RRM1_SECp43 7..90 CDD:241054 1/3 (33%)
RRM2_SECp43 99..180 CDD:241056 26/81 (32%)
DAZLNP_001177740.1 RRM_DAZL 55..136 CDD:241116 27/85 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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