Protein Alignment Secp43 and Elavl2

DIOPT Version :9

• Sequence 1: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_036019590.1
• Gene: Elavl2 / 15569
• MGIID: 1100887
• Length: 530
• Species: Mus musculus
• Alignment Length: 166
• Identity: 50/166 - (30%)
• Similarity: 89/166 - (53%)
• Gaps: 15/166 - (9%)

  Fly    13 LESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKPIPGTN 77
            |...||:..:.:.|..:|| ..:.:|:|:|.||:..||.|||:|....|..|::.|||
Mouse   216 LPQNMTQEELKSLFGSIGE-IESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG------- 272

  Fly    78 PIVRFRLNSASNSYKLPGNE--REFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDSL-GF 139
              :|.:..:...||..|.:.  |:.:::|..|...:...:|.::| |::..|.|:::::|.: |.
Mouse   273 --LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGI 334

  Fly   140 SKGYGFVRFGIEDEQKSALYDMNGYIGLG-TKPIKI 174
            |:|.||:||....|.:.|:..:||....| |:||.:
Mouse   335 SRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	23/76 (30%)
		RRM2_SECp43	99..180	CDD:241056	23/78 (29%)
Elavl2	XP_036019590.1	ELAV_HUD_SF	206..529	CDD:273741	50/166 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D775799at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920