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Protein Alignment CG15439 and SDG29

DIOPT Version :10

Sequence 1:	NP_608836.1	Gene:	CG15439 / 33651	FlyBaseID:	FBgn0031606	Length:	1008	Species:	Drosophila melanogaster
Sequence 2:	NP_200155.2	Gene:	SDG29 / 835424	AraportID:	AT5G53430	Length:	1043	Species:	Arabidopsis thaliana

Alignment Length:	476	Identity:	110/476 - (23%)
Similarity:	180/476 - (37%)	Gaps:	121/476 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 TTQALLDFDLGESSS-DSD----------FLPD------------------IDNCSDGSKDESDG 45
            |.:...||:|.:|.. ||.          .|||                  :..|..||
plant   465 TCRTKFDFELSDSEKPDSKSKLGKNNAPMVLPDKVIVVCSGVEGIYFPSLHLVVCKCGS------ 523

  Fly    46 DGSSSDASGGSDSESDSDAESEDSTLQLRQLLAETEPSPLENGINGV-----DHCAASSPAAPVV 105
            .|....|....:..:.|.|::..::::::     :...|||..:..:     :..||..|..|.:
plant   524 CGPERKALSEWERHTGSKAKNWRTSVKVK-----SSKLPLEEWMMKLAEFHANATAAKPPKRPSI 583

  Fly   106 PRAPLQLSSAPAKR-----------MCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSIS 159
            .:...:|.|...::           .|.||......|.|:|:.|:.|.::||:.|||
plant   584 KQRKQRLLSFLREKYEPVNVKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYG-------- 640

  Fly   160 STNSTCSTEPWFCEACRAGVSEPDCELCPNKGGIYKETDVGK-WVHLICALYVPGVAFGEVEQLS 223
             |.:......|.|:||.....:.:|.|||.|||..|.|||.. |||:.||.:.|.|.|...|::.
plant   641 -TRNVRDFTSWVCKACETPEIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKME 704

  Fly   224 -SVTLFEMQYSKWGAKVCSLCENALFARTGVCIGCDAGMCKTYFHVTCAQVAGFLIEAH---HED 284
             ::.:..:..|.: .|:|.:|:..    .|.|..|  ..|.||:|..||..||:.:|.|   ...
plant   705 PALGILSIPSSNF-VKICVICKQI----HGSCTQC--CKCSTYYHAMCASRAGYRMELHCLEKNG 762

  Fly   285 DAADPFYAHCKVH------------------SEKEMIKKRRRNYHTLRLNMMQRAREKEALAAEH 331
            .......::|..|                  |.|.:::.::::  ..||.:..| .|.|..|||.
plant   763 RQITKMVSYCSYHRAPNPDTVLIIQTPSGVFSAKSLVQNKKKS--GTRLILANR-EEIEESAAED 824

  Fly   332 ETPAPHPNPAQARIQRKLLK---------IQHKYTRHKELKPTPWVPTQKMSRLLT---TSASAC 384
            ..|....:.|:.|:.::.:.         |.| ||......|:..:.|....|.:.   .|.|:.
plant   825 TIPIDPFSSARCRLYKRTVNSKKRTKEEGIPH-YTGGLRHHPSAAIQTLNAFRHVAEEPKSFSSF 888

  Fly   385 RRLLAKAEIMSVDVQHLEQRE 405
            |..|          .||::.|
plant   889 RERL----------HHLQRTE 899

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.