back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG15439 and SDG16

DIOPT Version :10

Sequence 1:	NP_608836.1	Gene:	CG15439 / 33651	FlyBaseID:	FBgn0031606	Length:	1008	Species:	Drosophila melanogaster
Sequence 2:	NP_194520.3	Gene:	SDG16 / 828904	AraportID:	AT4G27910	Length:	1027	Species:	Arabidopsis thaliana

Alignment Length:	456	Identity:	110/456 - (24%)
Similarity:	150/456 - (32%)	Gaps:	170/456 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 TTQALLDFDLGESSSDSD-----------FLPD-----------------------IDNCSDGSK 40
            |.:|..:|||.:|...:.           .|||                       ..:|....|
plant   450 TCRAKFNFDLSDSEKQNSKSKVAKGDGQMVLPDKVIVVCAGVEGVYFPRLHLVVCKCGSCGPKKK 514

  Fly    41 DESDGD---GSSSDASGGSDSESDSDAESEDSTLQLRQLLAETEPSPLENGINGVDHCAASSPAA 102
            ..|:.:   ||.|.....|.....|....||..:.|.:|.|..              .||..|..
plant   515 ALSEWERHTGSKSKNWKTSVKVKSSKLALEDWMMNLAELHANA--------------TAAKVPKR 565

  Fly   103 PVVPRAPLQL--------SSAPAK---RMCCVCLGERSDDVNEIVECDSCGVSVHEGCYG---VS 153
            |.:.:...:|        ....||   ..|.||......|.|:|:.|:.|.::||:.|||   |.
plant   566 PSIKQRKQRLLAFLSETYEPVNAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARHVR 630

  Fly   154 DNVSISSTNSTCSTEPWFCEACRAGVSEPDCELCPNKGGIYKETDVGK-WVHLICALYVPGVAFG 217
            |..|            |.|:||.....:.:|.|||.|||..|.|||.. |||:.||.:.|.|.|.
plant   631 DFTS------------WVCKACERPDIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFA 683

  Fly   218 EVEQLS-SVTLFEMQYSKWGAKVCSLCENALFARTGVCIGCDAGMCKTYFHVTCAQVAGFLIEAH 281
            ..|::. :|.:..:..:.: .|:|.:|:..    .|.|..|  ..|.||:|..||..||:.:|.|
plant   684 SEEKMEPAVGILSIPSTNF-VKICVICKQI----HGSCTQC--CKCSTYYHAMCASRAGYRMELH 741

  Fly   282 ---------------------------------------------------------HEDDAA-- 287
                                                                     .|||.|
plant   742 CLEKNGQQITKMVSYCAYHRAPNPDNVLIIQTPSGAFSAKSLVQNKKKGGSRLISLIREDDEAPA 806

  Fly   288 ------DPF-YAHCKVHSEKEMIKKRRRNYHTLRLNMMQRAREKEALAAEHETPAPHPNPAQARI 345
                  ||| .|.|:|...|...|||               .|:||:  .|.|..|. :.|.|.|
plant   807 ENTITCDPFSAARCRVFKRKINSKKR---------------IEEEAI--PHHTRGPR-HHASAAI 853

  Fly   346 Q 346
            |
plant   854 Q 854

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.