DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15439 and Phf14

DIOPT Version :10

Sequence 1:NP_608836.1 Gene:CG15439 / 33651 FlyBaseID:FBgn0031606 Length:1008 Species:Drosophila melanogaster
Sequence 2:XP_006236166.1 Gene:Phf14 / 500030 RGDID:1563764 Length:950 Species:Rattus norvegicus


Alignment Length:1064 Identity:317/1064 - (29%)
Similarity:439/1064 - (41%) Gaps:379/1064 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ITTQALLDFDLGESSSDSDFLPDI---DNCSDGSKDESDGDGSSSDASGGSDSESDSDAESEDST 70
            ::.:.|.|.|..:|..|:|:.|.:   ...|...|:.||||....| ..||.||.|.:.|..|. 
  Rat   187 VSMEELNDMDDYDSEDDNDWRPTVVKRKGRSASQKEGSDGDNEDDD-DEGSGSEEDENDEGNDE- 249

  Fly    71 LQLRQLLAETEPSPLENGINGVDHCAASSPAAPV-------------------VPRAPLQLSSAP 116
                                  ||   ||||:..                   :....|.||.:.
  Rat   250 ----------------------DH---SSPASEAGGKKKKSKVLSRNSADDEELTNDSLTLSQSK 289

  Fly   117 AKR--------------------MCCVCLGERSDDVNEIVECDSCGVSVHEGCYGV-SDNVSISS 160
            :..                    :||||||:.|:|.:||::||:||::|||||||| .::.||.|
  Rat   290 SNEDSLILEKSQNWSSQKMDHILICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMS 354

  Fly   161 TNSTCSTEPWFCEACRAGVSEPDCELCPNKGGIYKETDVGKWVHLICALYVPGVAFGEVEQLSSV 225
            :.|..|||||||:||:.||| |.||||||:.||:||||.|:|||::|||||||||||::::|..|
  Rat   355 SASENSTEPWFCDACKCGVS-PSCELCPNQDGIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPV 418

  Fly   226 TLFEMQYSKWGAKVCSLCENALFARTGVCIGCDAGMCKTYFHVTCAQVAGFLIEAHHEDDAADPF 290
            ||.||.|||:|||.||.||:..||||||||.||||||:.||||||||..|.|.||..|:|.||||
  Rat   419 TLTEMNYSKYGAKECSFCEDPRFARTGVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPF 483

  Fly   291 YAHCKVHSEKEMIKKRRRNYHTLR--LNMMQRAREKEALAAEHETPAPHPNPAQARIQRKLLKIQ 353
            :|:||.|:::...|.:|:||..|:  ..|..:.|||: |:.|          |||||..:|.:.:
  Rat   484 FAYCKQHADRLDRKWKRKNYLALQSYCKMSLQEREKQ-LSPE----------AQARINARLQQYR 537

  Fly   354 HKYTRHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQREAHINALTDIRKKW 418
            .|....:..:|..|||.:|:.|.||:||||.|:|:.|||:|.:.........:..::..|.|:| 
  Rat   538 AKAELARSTRPQAWVPREKLPRPLTSSASAIRKLMRKAELMGISTDIFPVDNSDTSSSVDGRRK- 601

  Fly   419 HIAPAFSVEFTAYYMDRIVRMDDFRQQQRELISHNAILSKDQDVLRAQYDTALEERKAVKATKDS 483
            |..||.:.:|..||.:|.:||...::...|..:....|..:|:.|..:|:...|..:.::.....
  Rat   602 HKQPALTADFVNYYFERNMRMIQIQENMAEQKNIKDKLENEQEKLHVEYNKLCESLEELQNLNGK 666

  Fly   484 LLTSIKSLHTALGQI-APNMTLPSVDLIAHPLPEAPPKTSTPTPPQRPISVPTAAALKMGVGFPL 547
            |.:..:.:...||:| ...:.:|::  :..|....|.|....|  |:..|:||..          
  Rat   667 LRSEGQGIWALLGRITGQKLNVPAI--LRAPKERKPSKKEGGT--QKTSSLPTVL---------- 717

  Fly   548 GHLGPPGSKMDSSRMLSTHAKQGKHSTSSASVEAAPSVSCGICKRSKDQHLLVKCDTCNLHYHLG 612
                                                 .||||||::.|||||:.||||.||||||
  Rat   718 -------------------------------------YSCGICKKNHDQHLLLLCDTCKLHYHLG 745

  Fly   613 CLNPPLTRPPKKSKQYGWQCSECCDKSEGSDAVTEISSGPRKSRTRFNKDGHLVYVDRYSLDDIP 677
            ||:|||||.|:|:|...||||| ||::..||...|:                             
  Rat   746 CLDPPLTRMPRKTKNSYWQCSE-CDQAGSSDMEAEM----------------------------- 780

  Fly   678 VAAVNVPKESHTKRALNKSLPAPAPEYIEDLTKSPKRPKLQSPCK-TPINVPAENVTPTTDAAPV 741
                                   |.|.:.|.||..:| :::.|.| .|.:||             
  Rat   781 -----------------------AMETLPDGTKRSRR-QIKEPVKFVPQDVP------------- 808

  Fly   742 AASAATPAAAPTLPTPNTIVINLSGCEDSIDDSSGKLSRKGKRKDKHKNKHNLSSDTEKSIGKEH 806
                         |.|..|.|                                         :..
  Rat   809 -------------PEPKKIPI-----------------------------------------RNT 819

  Fly   807 KRKRKKRAHLDESSTHLDNAGNTSGSTIKIIFKALRLPGEDAPESQYFYVPANAVRSVDEASRPT 871
            :.:.:||:.:.|...|                                                 
  Rat   820 RTRGRKRSFVPEEEKH------------------------------------------------- 835

  Fly   872 SVETVEDSVQGAEQALAPIVLPAASPQKVREPKETAASASVNPTPSPKRKVSPRKASPRKPRVGR 936
                                       :.|.|:|                           |..|
  Rat   836 ---------------------------EERVPRE---------------------------RRQR 846

  Fly   937 PRVSNAKPNVE---ISCCVCSQTGKSNQVVT----------CDECHRHYHFACLDPPLKKSPKIR 988
            ..|...||..|   ..|..|..||::..:|:          ||||...|||.|||||||||||..
  Rat   847 QSVLQKKPKAEDLRTECSTCKGTGENENLVSRMRLSEAKNRCDECRLCYHFGCLDPPLKKSPKQT 911

  Fly   989 GYSWHCADCDPT----DEDALPKK 1008
            ||.|.|.:||.:    ||:...||
  Rat   912 GYGWICQECDSSSSKEDENEAGKK 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15439NP_608836.1 PHD1_PHF14 120..175 CDD:277036 33/55 (60%)
ePHD_PHF14 184..297 CDD:277144 78/112 (70%)
PHD2_PHF14 586..635 CDD:277037 35/48 (73%)
PRK10819 854..>938 CDD:236768 5/83 (6%)
PHD3_PHF14 949..997 CDD:277038 27/57 (47%)
Phf14XP_006236166.1 PHD1_PHF14 313..369 CDD:277036 33/55 (60%)
ePHD_PHF14 377..490 CDD:277144 78/112 (70%)
PHD2_PHF14 719..768 CDD:277037 36/49 (73%)
PHD3_PHF14 862..920 CDD:277038 27/57 (47%)

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