DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15439 and Alh

DIOPT Version :10

Sequence 1:NP_608836.1 Gene:CG15439 / 33651 FlyBaseID:FBgn0031606 Length:1008 Species:Drosophila melanogaster
Sequence 2:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster


Alignment Length:898 Identity:200/898 - (22%)
Similarity:303/898 - (33%) Gaps:303/898 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 CCVCLGERSDDVNEIVECD--SCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRA--GVSE 181
            ||||..||....|.:|.||  :|.|:||:.|||:          .|..|.||:|..|.:  ..|.
  Fly    61 CCVCSDERGWPENPLVYCDGQNCTVAVHQACYGI----------VTVPTGPWYCRKCESQERTSR 115

  Fly   182 PDCELCPNKGGIYKETDVGKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCE-- 244
            ..|||||::.|..|:||...|.|::||||:|.|.||.|..:..:.|..:...:: :|.|.:|:  
  Fly   116 VRCELCPSRDGALKKTDNSGWAHVVCALYIPEVRFGNVTTMEPIILSLIPQERY-SKTCYICQEI 179

  Fly   245 ---NALFARTGVCIGCDAGMCKTYFHVTCAQVAGFLIE--AHHEDDAADPFYAHCKVHSEKEMIK 304
               |.  |..|.|:.|:...||..|||||||..|.|.|  .::.|:.  .:..:|:.|..|   .
  Fly   180 GKPNR--ANVGACMQCNKSNCKQQFHVTCAQSLGLLCEEAGNYLDNV--KYCGYCQHHYSK---L 237

  Fly   305 KRRRNYHTLRLNMMQRAREKEALAAEHETPAPHPNPAQARIQRKLLKIQHKYTRHKELKPTPWVP 369
            |:..|..|:                      |...|           |||               
  Fly   238 KKGGNVKTI----------------------PPYKP-----------IQH--------------- 254

  Fly   370 TQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQREAHINALTDIRKKWHIAPAFSVEFTAYYMD 434
                    .||:.:|..  .:.||           ::.:|:.|        ..|..::.|     
  Fly   255 --------DTSSDSCSS--PEKEI-----------DSTMNSAT--------TSATIIKIT----- 285

  Fly   435 RIVRMDDFRQQQRELISHNAILSKDQDVLRAQ--------------YDTALEERKAVKATKDSLL 485
                            |.:.......:||.|.              ..::.::||:..::|.|..
  Fly   286 ----------------SSSGSAGGSSNVLNASSSAGISAGSSSGSGVSSSAKQRKSNASSKSSSS 334

  Fly   486 TSIKSLHTALGQIAPNMTLPSVDLIAHPLPEAPPKTSTPTPPQRPISVPTAAALKMGVGFPLGHL 550
            :|..|..:..|  |||                 |.:|         ||.:.:|..|..|   |.:
  Fly   335 SSSSSSSSTGG--APN-----------------PSSS---------SVHSGSASNMTGG---GSV 368

  Fly   551 GPPGSKMDS-SRMLSTHAKQGKHSTSSASVEAAPSVSCGICKRSKDQHLLVKCDTCNLHYHLGCL 614
            .|..|.:.: |..|:.:...|..|||||.  ..|..|.||...|..                   
  Fly   369 LPGSSNIGNISNSLNNNLPGGSSSTSSAG--NVPGGSGGIISASSG------------------- 412

  Fly   615 NPPLTRPPKKSKQYGWQCSECCDKSEGSDAVTE-ISSGPRKSRTRFNKDGHLVYVDRYSLDDIPV 678
            ....:...:.|...|...|.....|..|::..| .|....||.:..:|||               
  Fly   413 GATQSTSSQSSTAPGTTKSSASSSSSSSNSYKEKHSKSLSKSTSSKDKDG--------------- 462

  Fly   679 AAVNVPKESHTKRALNK--SLPAPAPEYIEDLTKSPKRPKL-------QSPCKT-------PINV 727
                  |:|.|..|.|.  :..|.:.......|:.....||       |.|..|       .||.
  Fly   463 ------KDSSTNSANNNFTNSSASSTSSNSSSTREKSSSKLSKNKDSNQVPSATSSLSTTSSINT 521

  Fly   728 PAENVTPTTDAAP------VAASAAT-----PAA-------APTLPTPNTIVINLSGCEDSIDDS 774
            ...:.|.|..|..      |::|||:     |:.       |.||.|..|...:.:|...|:.:.
  Fly   522 QPSSSTSTATAGSGGTGTHVSSSAASGLNSAPSTTNEHSNHAHTLSTNGTGAGSAAGKLQSVSNL 586

  Fly   775 SGKLSRKGKRKDKHKNKHNLSSDTEKSIGKEHKRKRKKRAHL----------------------D 817
            |.  |..|...|......:.||....|.|........:|.:|                      .
  Fly   587 SN--SSSGFGSDLRSVSTSSSSTVNDSTGGFGSNSNSERENLSGAGSSASNMPGTIAPGTGGVSS 649

  Fly   818 ESSTHLD-NAGNTSGSTIKIIFKALRLPGEDAPESQYFYVPANAVRSVDEASRPTSVET----VE 877
            .::|:|. |.|.:|.||...:.......|..:..|       :..|..|.|...:|:.|    :|
  Fly   650 SAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSS-------SKKRKADSAKSTSSISTSGSALE 707

  Fly   878 DS--------VQGAEQALAPIV-----LPAASPQKVRE----PKETAASASVN 913
            |:        ::..:.||.|:.     :..:|.::..|    ..:|:|:|.||
  Fly   708 DNNSLISRYDIKDVQVALTPLTDFEKEIEKSSKRQRTELSPPTHQTSATAEVN 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15439NP_608836.1 PHD1_PHF14 120..175 CDD:277036 22/55 (40%)
ePHD_PHF14 184..297 CDD:277144 43/119 (36%)
PHD2_PHF14 586..635 CDD:277037 7/48 (15%)
PRK10819 854..>938 CDD:236768 17/81 (21%)
PHD3_PHF14 949..997 CDD:277038
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 22/55 (40%)
ePHD_AF10_like 118..233 CDD:277142 43/119 (36%)
CC_AF10 1636..1699 CDD:411015
Blue background indicates that the domain is not in the aligned region.

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