DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS18 and cima-1

DIOPT Version :9

Sequence 1:NP_608835.1 Gene:MFS18 / 33650 FlyBaseID:FBgn0025684 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001294208.1 Gene:cima-1 / 24104589 WormBaseID:WBGene00018473 Length:543 Species:Caenorhabditis elegans


Alignment Length:459 Identity:112/459 - (24%)
Similarity:175/459 - (38%) Gaps:92/459 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FITL--------ITGTCMLYSTRTTMPLLVPAVASAQKWSKTDSGTVLSSFFWGYTLTQVVGGYF 86
            ||||        :...||     |:.|  |.......:|.....|.||::...| :|..:|.|.:
 Worm    78 FITLSISSSNLAVALICM-----TSCP--VHGYGGTLEWQSQQEGLVLAAQNAG-SLIMIVTGMW 134

  Fly    87 SDRFGGQRVI----LFAAIGWSLITFLMPTIIWTAGSIKSYAIPFIVAIRILNGALQGVHFPSMI 147
            :||..|:.::    |...||..::..|.....|           |.|..||..||......|::.
 Worm   135 ADRLNGKWMVFIGLLLCCIGNLMLPLLASKSFW-----------FAVLARISIGASDACLMPAVN 188

  Fly   148 SLTSQNLCPNERSSFFGLLTAGSALGTLLTGIMGSFL------LDYFGWSYVFRVIGLMGIAWAL 206
            ||.::.....||.:..||::.|..:|||.......:|      ||  ||..:|.:...:.:   |
 Worm   189 SLITRWFPQAERPAAIGLISGGRQIGTLFILPTAGYLCTRKDILD--GWPAIFYLSATISV---L 248

  Fly   207 VLRYYAMAGERNRIINIATPSR---------LCAN--KSPAETSAVPWLRYFRRLSFWACVLTHA 260
            |..::...|.......|...||         .|.:  |....|..||:.........|||:....
 Worm   249 VTVFWIPFGADKPAKQICISSREKEFIETRIACESIGKRTDRTRRVPYGAMLHSKPLWACIFALI 313

  Fly   261 CEMNCFFVLLSWLPTYFHD--GFPHAKGWVVNMIPWLALPPCTLF----AKYLTTRLLAREWHTT 319
            |......::|.:||.|..|  .|...|..::..:|.|.|.....|    :.||||:|   ....|
 Worm   314 CHEYPLVIMLQFLPNYMRDVLEFAPTKNGIIAALPILCLFLSKTFSSSLSSYLTTKL---RLDKT 375

  Fly   320 TVRKVIQSCCFAAQNLALFV-----MSRTSDFHTALICMTIIIGGTGFHNNAVTVNPQDLAPLHS 379
            .|.|...:  .|:..||:.:     .::.|.| .|:.|:...:...|.|...|......:||..|
 Worm   376 FVCKGFNA--VASAGLAICISFVPFFNKESAF-LAVFCLCGAMIFAGLHTPGVITAMVQIAPAFS 437

  Fly   380 GSV----------FGLMNTVGAIPGFLGVYL--AGHILELTQSWPMVFSAAAGINLVGWIIFIVF 432
            |.:          |.:.|.:      |..|:  :|.:.|    |.|||..:|.:..:..|:|.::
 Worm   438 GIITGWSFFAVAWFSIGNKI------LTKYIVQSGSVTE----WGMVFRVSALVAALPVIVFTIW 492

  Fly   433 GSAE 436
            |||:
 Worm   493 GSAD 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS18NP_608835.1 MFS 30..432 CDD:119392 109/453 (24%)
MFS_1 32..397 CDD:284993 96/414 (23%)
cima-1NP_001294208.1 2A0114euk 63..506 CDD:129972 112/459 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4312
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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