DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS18 and slc-17.4

DIOPT Version :9

Sequence 1:NP_608835.1 Gene:MFS18 / 33650 FlyBaseID:FBgn0025684 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_503071.2 Gene:slc-17.4 / 189054 WormBaseID:WBGene00012130 Length:573 Species:Caenorhabditis elegans


Alignment Length:412 Identity:102/412 - (24%)
Similarity:168/412 - (40%) Gaps:61/412 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WSKTDSGTVLSSFFWGYTLTQVVGGYFSDRFGGQRVILFAAIG-WSLITFLMPTIIWTAGSIKSY 123
            |:..:...:.|..|||..:|.:...:|.:|: ..|.:|.||:| :.|:|.:.|.|....|     
 Worm   113 WNSQEQNLIFSGTFWGSIITVLPSMFFINRY-SPRYVLQAAVGCYILMTAITPYIATRFG----- 171

  Fly   124 AIPFIVAI-RILNGALQGVHFPSMISLTSQNLCPNERSSFFGLLTAGSAL-GTLLTGIMGSFLLD 186
              |:.|.| |::.|..:|...|:..::.:......|||:...|.|.|:.: |.....:..|....
 Worm   172 --PYPVFISRVIMGLGEGFILPANNAILANWFPSAERSTAISLFTTGNQMAGAGGNPVAASLCAS 234

  Fly   187 YFGWSYVFRVIGLMGIAWALVLRYYAMAGERNRIINIATPSR---LCAN-----KSPAETSAVPW 243
            .|||..:|....::...|::.  ::..|..:.....:.|.:.   |.||     .....:..||:
 Worm   235 SFGWPSIFYFASIVSTIWSVC--WFLTASNQPSKCKVMTKTERDYLDANVVRRSNKTNRSLVVPY 297

  Fly   244 LRYFRRLSFWACVLTHACE--MNCFFVLLS-WLPTYFHDGFPHAKGWVVNMIPWLALPPCTLFAK 305
            .:..:..:|.|.:|   |:  :|....||. :||.||.|.. |. |.:.|. .:.::|....|| 
 Worm   298 SKILKSPAFLAQLL---CQFVINFIVTLLQIYLPNYFKDVL-HL-GVIANG-TYTSVPNIVNFA- 355

  Fly   306 YLTTRLLAREWHTTTVR---KVIQSCCFA---AQNLA------------LFVMSRTSDFHTALIC 352
                  |...|..|..|   |.|.|..|.   :|::|            .||............|
 Worm   356 ------LKIVWGITIDRAKEKKIISGTFGVKLSQSIANFGGALFLILITYFVDCTNPTLGFVFFC 414

  Fly   353 MTIIIGGT---GFHNNAVTVNPQDLAPLHSGSVFGLMNTVGAIPGFLGVYLAGHILELTQSWPMV 414
            |.....||   ||:.:.:::.|:..|.:.|.|||..|....|.|..:|:....:.|   ..|..:
 Worm   415 MMYGCMGTLVSGFYTSLLSLAPKYTATMSSISVFCAMMGRLATPAIVGLIKKQNTL---SEWQTL 476

  Fly   415 FSAAAGINLVGWIIFIVFGSAE 436
            |...|..|::...:|:||||.|
 Worm   477 FLVCAAANIICGAVFLVFGSGE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS18NP_608835.1 MFS 30..432 CDD:119392 97/406 (24%)
MFS_1 32..397 CDD:284993 90/371 (24%)
slc-17.4NP_503071.2 MFS 34..495 CDD:391944 98/407 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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