DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS18 and C18D1.2

DIOPT Version :9

Sequence 1:NP_608835.1 Gene:MFS18 / 33650 FlyBaseID:FBgn0025684 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_496174.2 Gene:C18D1.2 / 182781 WormBaseID:WBGene00007669 Length:478 Species:Caenorhabditis elegans


Alignment Length:483 Identity:97/483 - (20%)
Similarity:177/483 - (36%) Gaps:111/483 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RHEKRVWFITLITGTCMLYSTRTTMPL--LVPAVASAQKWSKTD----SGTVLSSFF-------W 74
            ||..| :||..:...|:..|...|:.|  .:..:::...::.|:    |..||....       :
 Worm    11 RHRTR-FFILFLCLLCLSISQSNTLTLNFTIICMSTLHNFTATEASEKSTNVLDFMLHKILQKTY 74

  Fly    75 GYTLTQ--------VVGG--------YFSDRFGGQRVILFAAIGWSLITFLMPTIIWTAGSIKSY 123
            .||.:|        .:|.        |...:.|.:.|:.|..:..:..|.::|   | |..:..|
 Worm    75 VYTASQSNLLFSAVAIGAMCAVYPFMYIIQKKGSRSVVTFVGLFSAATTAMIP---W-AAYLGFY 135

  Fly   124 AIPFIVAIRILNGALQGVHFPSMISLTSQNLCPNERSSFFGLLTAGSALGTLLT-GIMGSFLLDY 187
            .   ::|:|.|.|......|..:..:|.|.....:.:.||..|:....:|.:.| .:..:|....
 Worm   136 P---LLAMRFLQGIGLSTGFTLIGIVTRQWSMQVQGAFFFACLSCFFQIGPIFTMPVASAFCTSS 197

  Fly   188 FGWSYVFRVIGLMGIAWALVLRYYAMAGERNRIINIATP---SRLCANKSPAETSAVPWLRYFRR 249
            |||..|:....::.|  .:.|.::.:..|......|.|.   |::...|...:...||.::..|.
 Worm   198 FGWPAVYYTHSIVTI--FIFLLFFTLYRESPVFHTIVTELELSKIQRGKGETKRQRVPLVQILRD 260

  Fly   250 ---LSFWACVLTHACEMNCFFVLLSWLPTYFHD--GFPHAKGWVVNMIPWLALPP-CTLFAK--- 305
               ||.|...|.:...:.   :.:.:.|||.|.  ||.     |.:..|:.|||. .|.|.|   
 Worm   261 PVVLSIWTTALANFMGIQ---LTMQFTPTYLHKILGFS-----VQDTGPFSALPQVITAFVKVSA 317

  Fly   306 -YLTTRLLAREWHTTTVRKVIQSCCFAAQNLALF---------------VMSRTSDFHTALICMT 354
             |...:|               .||....::.:|               .:..||..:..|..:.
 Worm   318 GYSADKL---------------QCCTPKTSVRIFNSLALGGMSFMFVGLAIIPTSMPYLGLFMLI 367

  Fly   355 I---IIG---GTGFHNNAVTVNPQDLAPLHSGSVFGL---MNTVGAI--PGFLGVYLAGHILELT 408
            :   |||   |..|..:|:      .|..|:..|.|:   :|.:.|:  |..:.:::..   :..
 Worm   368 LSCSIIGFNCGGFFRCSAI------YAAQHNHFVMGMNSFLNCLAALLAPVIVNIFVEN---DTW 423

  Fly   409 QSWPMVFSAAAGINLVGWIIFIVFGSAE 436
            ..|..|:.:...|..:..::|.::...|
 Worm   424 NEWYWVWMSHFVILFLSNLVFQIYAKGE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS18NP_608835.1 MFS 30..432 CDD:119392 93/470 (20%)
MFS_1 32..397 CDD:284993 87/433 (20%)
C18D1.2NP_496174.2 MFS 36..448 CDD:391944 88/452 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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