DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS18 and slc-17.3

DIOPT Version :9

Sequence 1:NP_608835.1 Gene:MFS18 / 33650 FlyBaseID:FBgn0025684 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_498709.2 Gene:slc-17.3 / 182107 WormBaseID:WBGene00015333 Length:535 Species:Caenorhabditis elegans


Alignment Length:418 Identity:92/418 - (22%)
Similarity:169/418 - (40%) Gaps:73/418 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WSKTDSGTVLSSFFWGYTLTQVVGGYFSDRFGGQRVILFAAIGWSLITFLMPTIIWTAGSIKSYA 124
            |:..:...:.|..|||..:|.:...:|.:||..:.|:..:...:.|:|.:.|.:....|    |.
 Worm   100 WNSYEQNLIFSGTFWGSLITVLPSMFFIERFSPRHVLQISVALYILVTVITPFLATHFG----YF 160

  Fly   125 IPFIVAIRILNGALQGVHFPSMISLTSQNLCPNERSSFFGLLTAG----SALGT-LLTGIMGSFL 184
            ..|:.  ||..|..:|..||:..::.......:|:|:...:.|.|    ||.|: ::..:..|.|
 Worm   161 SVFLA--RIGMGLGEGFVFPTNNAIIGNWFPSSEKSTALSIFTLGNQIASAAGSPMVAAVCASDL 223

  Fly   185 LDYFGWSYVFRVIGLMGIAWALVLRYYAMAGERNRIINIATPSR---LCAN------KSPAETSA 240
                ||...|...|:....|:::  ::..|......:.:.|...   |.||      || .:|.:
 Worm   224 ----GWPATFYFAGIFATGWSIL--WFFTASSHPAKVKMMTKKEKEYLLANVVKKVHKS-EKTRS 281

  Fly   241 VPWLRYFRRLSFWACVLTHACEMNCFFVLLS-WLPTYFHD-------------GFPHAKGWVVNM 291
            :|:.:.....:|...:..|.. :|.|..|.. :||:||.:             ..|:....:..:
 Worm   282 IPYSKILTSPAFLGQLQCHFF-VNLFMTLFQIYLPSYFKEVLHLGVIANGTFTAIPNIFNMIFKV 345

  Fly   292 IPWLALPPCTLFAKYLTTRLLAREWHTTTVRKVIQSCC-----FAAQNLALFVMSRTSDFHTALI 351
            :..:.:.      |....::|:    .|...||.....     |:...||.||  ..|:..|.||
 Worm   346 VWGIGID------KLKENKILS----NTKAVKVSHGVASFGSSFSLILLAFFV--DCSNPTTGLI 398

  Fly   352 --CMTIIIGGT---GFHNNAVTVNPQDLAPLHSGSVFGLMNTVGAI--PGFLGVYLA-GHILELT 408
              |:.....||   ||:.:.:::.||..|.:.:.|:|..|  :|.:  |..:.::.. |...|  
 Worm   399 FFCLMYSSMGTFVSGFYTSLLSLAPQYTATMSAISMFVAM--IGRLTTPAVMSMFRKDGTAAE-- 459

  Fly   409 QSWPMVFSAAAGINLVGWIIFIVFGSAE 436
              |..:|...:..::....||::|||.|
 Worm   460 --WQNIFIGCSLAHIFSGSIFLLFGSGE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS18NP_608835.1 MFS 30..432 CDD:119392 88/412 (21%)
MFS_1 32..397 CDD:284993 82/376 (22%)
slc-17.3NP_498709.2 2A0114euk 20..496 CDD:129972 92/418 (22%)
MFS 90..481 CDD:119392 88/412 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.