DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS18 and slc-17.8

DIOPT Version :9

Sequence 1:NP_608835.1 Gene:MFS18 / 33650 FlyBaseID:FBgn0025684 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001023848.1 Gene:slc-17.8 / 179234 WormBaseID:WBGene00017798 Length:527 Species:Caenorhabditis elegans


Alignment Length:432 Identity:105/432 - (24%)
Similarity:184/432 - (42%) Gaps:55/432 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CMLYSTRT---------TMPLLVPAVASAQKWSKTDSGTVLSSFFWGYTLTQVVGGYFSDRFGGQ 93
            ||:.|:.|         ..|||        .||..:.|.:.|:|..|..:....|| .:|:|..:
 Worm    80 CMVNSSATYDNETYPENAAPLL--------DWSSDEQGYIFSAFNAGLLVMLFTGG-MADKFNAK 135

  Fly    94 RVILFAAIGWSLITFLMPTIIWTAGSIKSYAIPFIVAIRILNGALQGVHFPSMISLTSQNLCPNE 158
            .:||.:....||..|.:|   |.|    ..::.:.:..|.|.|....:..|:|.||.::....:|
 Worm   136 YMILVSVAIASLANFTLP---WMA----PISVYWAIFSRFLVGFADALLQPAMNSLITRWFPTSE 193

  Fly   159 RSSFFGLLTAGSALGTLL----TGIMGSFLLDYFGWSYVFRVIGLMGIAWALVLRYYAMAGERN- 218
            ||...||.|.|..:|||:    .|.:.|....:.||..:|.:.|.:|:.:  :..|..:..::. 
 Worm   194 RSYALGLATGGRQIGTLIIIPAAGALCSQTEIFGGWPSIFYLSGFIGVLF--IFSYIFLGADKPS 256

  Fly   219 ----------RIINIATPSRLCANKSPAETSAVPWLRYFRRLSFWACVLTHACEMNCFFVLLSWL 273
                      :.|.|:..|.....|....  .|||....:..:.||.|::..|.......|:.:|
 Worm   257 KQSCISDNELKFITISNQSEDVGKKRTER--KVPWKNILKSGAVWASVISLVCHEFPLMTLIMFL 319

  Fly   274 PTYFHD--GFPHAKGWVVNMIPWLALPPCTLFAKYLTTRLLAR-EWHTTTVRKVIQSCCFAAQNL 335
            |:|.||  .:...:..:::.:|.::|....:.:.||.|.|... .|...|:.||:.|  ..:..|
 Worm   320 PSYLHDVHHYHSTENGILSALPTVSLWFAKIGSSYLNTWLQKNTTWKKDTICKVLNS--IGSIGL 382

  Fly   336 ALFVMSRT--SDFHT--ALICMTIIIGGTGFHNNAVTVNPQDLAPLHSGSVFGLMNTVGAIPGFL 396
            .:|:::.|  .:.|.  |::.:.:.:...|.|.....:....:||.:||:|.|......|:.|.:
 Worm   383 GVFLLAATFLDNEHAWMAVLFLCLSMASAGLHTPGCQLALVSVAPAYSGAVTGFTFFFVAVSGII 447

  Fly   397 GVYLAGHILE--LTQSWPMVFSAAAGINLVGWIIFIVFGSAE 436
            ...:...|::  ....|.:||..:..|.:...|||.|:||.|
 Worm   448 HPIITKMIVKDRTAAEWNLVFYISTVIAIFPIIIFNVWGSTE 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS18NP_608835.1 MFS 30..432 CDD:119392 101/426 (24%)
MFS_1 32..397 CDD:284993 93/389 (24%)
slc-17.8NP_001023848.1 MFS_SLC17 57..486 CDD:340876 102/427 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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