DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS18 and Y4C6B.4

DIOPT Version :9

Sequence 1:NP_608835.1 Gene:MFS18 / 33650 FlyBaseID:FBgn0025684 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_741396.1 Gene:Y4C6B.4 / 177312 WormBaseID:WBGene00021158 Length:458 Species:Caenorhabditis elegans


Alignment Length:463 Identity:94/463 - (20%)
Similarity:173/463 - (37%) Gaps:90/463 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RVW------FITLITGTCMLYSTRTTMPLLVPAVASAQKWSKTD--SGTVLSSFFWGYTLTQVVG 83
            |:|      .|.|::..|::......:.:....:......|:|.  :||:.|  .:.||.|:...
 Worm     3 RIWGNYFRIIIVLLSFMCLVSVCSNYIIINFTFICMKDDLSQTTEVNGTLKS--IYDYTPTEKKY 65

  Fly    84 GYFSDRFG---------------GQRVILFAAIGWSLITF-LMPTIIWTAGSIKSYAIPFIVAIR 132
            ..::..||               |.|:..|:|...|.:|. |.|   |.|    :.::...||:|
 Worm    66 ILWAVAFGTMVGTFPINILYVKYGARIPFFSAGVLSAVTTGLTP---WAA----AQSMWIFVALR 123

  Fly   133 ILNGALQGVHFPSMISLTSQNLCPNERSSFFGLLTAGSALGTLLTGIMGSFLLDYFGWSYVF--- 194
            .|.|......|.::..:.|:....:|.:.|...||:.:::.:::|......:.|..||.:.|   
 Worm   124 FLQGVAYSADFAAIGIVISKWAPLDETAIFIATLTSFTSIASIITNGASGVICDTLGWQWSFYFH 188

  Fly   195 -RVIGLMGIAWALVLRYYAMAGERNRIINIATPSRLCANKSPAETSA---VPWLRYFRR---LSF 252
             ....|:...|.|:   |......::.:::.....:..|||.|....   ||:...|..   |:.
 Worm   189 SATCLLIFCCWVLI---YQDDPTFHKSVSVKELGWIQKNKSEAHIKVGMKVPYKAIFTSPVVLTV 250

  Fly   253 WACVLTHACEMNCFFVLLSWLPTYFHD--GFP-HAKGWVVNMIPWLALP---PCTLFA---KYLT 308
            |.|..|   |::...::.::.|.||..  ||. ...|:.:.::..:.||   .|...:   |.::
 Worm   251 WLCAFT---ELSTLILIATYGPIYFRSVLGFDIKIIGFYLGIMIAIHLPFRFVCAFLSDKTKCIS 312

  Fly   309 TRLLAREWHTTTVRKVIQSCCFAAQNLALFVMSRTSDFH--TALICMTII-----IGGTGFHNNA 366
            .......::|..|..|         .::..:..:....|  :|::|:.|:     ....||:.  
 Worm   313 EMGKIHIFNTLAVGFV---------GISFLIFGKIPPEHNISAVVCLAILECFISFNSGGFYK-- 366

  Fly   367 VTVNPQDLAPLH----SGSVFGLMNTVGAIPGFLGVYLAGHIL--ELTQS-WPMVFSAAAGINLV 424
                   ...||    |..|...:.....|..|.|..|....:  |..|: |..||...||.:.|
 Worm   367 -------CGTLHARQFSSIVISAIQFTKCISLFSGPALVAFFVTDESNQTQWSHVFMTLAGFSFV 424

  Fly   425 GWIIFIVF 432
            ..|:..:|
 Worm   425 ANILSFIF 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS18NP_608835.1 MFS 30..432 CDD:119392 91/452 (20%)
MFS_1 32..397 CDD:284993 79/412 (19%)
Y4C6B.4NP_741396.1 MFS 15..432 CDD:391944 90/449 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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