DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS18 and vglu-3

DIOPT Version :9

Sequence 1:NP_608835.1 Gene:MFS18 / 33650 FlyBaseID:FBgn0025684 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_499277.1 Gene:vglu-3 / 176442 WormBaseID:WBGene00011556 Length:544 Species:Caenorhabditis elegans


Alignment Length:404 Identity:96/404 - (23%)
Similarity:174/404 - (43%) Gaps:45/404 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WSKTDSGTVLSSFFWGYTLTQVVGGYFSDRFGGQRVILFAAIGWSLITFLMPTIIWTAGSIKSYA 124
            |:..:.|.:.||||:||..:|:..|..:.:|...::.:...    |:...|..:...:.:...|.
 Worm    93 WTGAEVGMMESSFFYGYAASQIPAGVLAAKFAPNKIFMLGI----LVASFMNILSAISFNFHPYT 153

  Fly   125 IPFIVAIRILNGALQGVHFPSMISLTSQNLCPNERSSFFGLLTAGSALGTLLTGIMGS-FLLDYF 188
            ..|::.::.:.|...||.:|:|..:......|.|||........||::| ::||:..| :|:.:|
 Worm   154 DIFVMVVQAVQGLALGVLYPAMHGVWKFWAPPLERSKLATTAFTGSSVG-VMTGLPASAYLVSHF 217

  Fly   189 GWSYVFRVIGLMGIAWALVLRY----------YAMAGERNRII----NIATPSRLCANKSPAETS 239
            .||..|.|.|::||.|:|:..|          |....|:.::.    ::|..:        ...:
 Worm   218 SWSTPFYVFGVVGIIWSLIWMYVSSHSPETHGYISDDEKKQVTEKIGDVAVKN--------MSLT 274

  Fly   240 AVPWLRYFRRLSFWACVLTHACEMNCFFVLLSWLPTYFHD---------GFPHAKGWVVNMIPWL 295
            .:||.......:.||.::...|....||:||....||..|         ||       :::.|..
 Worm   275 TLPWRDMMTSSAVWAIIICTFCRSWGFFLLLGNQLTYMKDVLHIDIKNSGF-------ISIFPQF 332

  Fly   296 ALPPCTLFAKYLTTRLLAR-EWHTTTVRKVIQSCCFAAQNLALFVMSRTSDFHTALICMTIIIGG 359
            .:...||....|...|.:. :..|..|||.:.:..|..:.:.|..::...|...|:.|:.|...|
 Worm   333 GMCIVTLATGQLCDYLRSSGKMSTEAVRKSVNTFGFTVEAMMLGCLAFVRDPVIAVTCLVIACTG 397

  Fly   360 TGFHNNAVTVNPQDLAPLHSGSVFGLMNTVGAIPGFLGVYLAGHILELTQSWPMVFSAAAGINLV 424
            :|...:...||..|:||.::..:.|:.|.:||:.|..|:.......:....|..||..|..|::.
 Worm   398 SGSVLSGFNVNHFDIAPRYAPILMGIANGLGAVAGVGGMVTNTVTYQNPDGWKWVFLLAMAIDIF 462

  Fly   425 GWIIFIVFGSAEAI 438
            |.|.|::|...:.:
 Worm   463 GVIFFLIFAKGDVL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS18NP_608835.1 MFS 30..432 CDD:119392 95/396 (24%)
MFS_1 32..397 CDD:284993 86/361 (24%)
vglu-3NP_499277.1 2A0114euk 47..485 CDD:129972 96/404 (24%)
MFS 52..471 CDD:119392 95/397 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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