DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elp3 and ELO3

DIOPT Version :9

Sequence 1:NP_608834.1 Gene:Elp3 / 33649 FlyBaseID:FBgn0031604 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_568725.1 Gene:ELO3 / 835098 AraportID:AT5G50320 Length:565 Species:Arabidopsis thaliana


Alignment Length:541 Identity:394/541 - (72%)
Similarity:460/541 - (85%) Gaps:0/541 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GVGLSRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAVPQDAKK 72
            |.||:.:|.:|..|.||:..:::.....::|:||.:|:....||||..:|:||::|||:|...::
plant    24 GRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIKTAACRKYGLARAPKLVEMIAALPDSERE 88

  Fly    73 ILLPKLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSM 137
            .|||||||||:||||||||||||.||||||||..|||||||||||||||||||||||||||||||
plant    89 TLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSM 153

  Fly   138 RAIRSRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSAN 202
            ||||:||:|::|.|.|::|||:|||||||||||:||||||.||.||||:||||||||||||:|||
plant   154 RAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSAN 218

  Fly   203 VAEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVR 267
            |.|||.|||.|.|||||:||||||||||..|:..||.||||||||||||.||||||||||||||.
plant   219 VEEAVAYSEHSATKCIGMTIETRPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVA 283

  Fly   268 AVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYE 332
            ||.:.|.|.||||:|:|.|||||||||..|||:|.|.|:||:|:||:||||||||||||||||||
plant   284 AVADCFCLAKDAGFKVVAHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYE 348

  Fly   333 LWKTGRYKSYPPSMLVDLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLG 397
            |||||||::|||..|||:||:||::|||||||||||||||||||:||||.|||||||||||.|||
plant   349 LWKTGRYRNYPPEQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLG 413

  Fly   398 TTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSPDT 462
            ..||||||||.|||:||:|::|.::||:||||.||.||||||||||..|||||||||||||..:.
plant   414 LKCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNV 478

  Fly   463 FRPELKGECSIVRELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVG 527
            ..|||.|:||:||||||||:.|||:.||..|.||||:|.|||||||||||.||.|.|:.||||||
plant   479 TCPELMGKCSVVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSNKIGVISGVG 543

  Fly   528 TRNYYRKMGYQLDGPYMSKSI 548
            ||:||||:||:|:||||.|.:
plant   544 TRHYYRKLGYELEGPYMVKHL 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp3NP_608834.1 ELP3 23..548 CDD:273503 388/524 (74%)
ELO3NP_568725.1 ELP3 39..564 CDD:273503 388/524 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 324 1.000 Domainoid score I271
eggNOG 1 0.900 - - E1_COG1243
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7105
Inparanoid 1 1.050 828 1.000 Inparanoid score I76
OMA 1 1.010 - - QHG62148
OrthoDB 1 1.010 - - D320059at2759
OrthoFinder 1 1.000 - - FOG0003595
OrthoInspector 1 1.000 - - oto3605
orthoMCL 1 0.900 - - OOG6_100741
Panther 1 1.100 - - LDO PTHR11135
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2945
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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