DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elp3 and Elp3

DIOPT Version :10

Sequence 1:NP_608834.1 Gene:Elp3 / 33649 FlyBaseID:FBgn0031604 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001240741.1 Gene:Elp3 / 74195 MGIID:1921445 Length:566 Species:Mus musculus


Alignment Length:561 Identity:449/561 - (80%)
Similarity:505/561 - (90%) Gaps:13/561 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KAKKKLGVG-------------LSRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGL 53
            |..|.:|.|             ||..|..:|.||::|::|::|||..|||:||:||:..|:||||
Mouse     6 KGAKYVGQGRKGGSGFSEITGDLSPAELMMLTIGDVIKQLVEAHEQGKDVDLNKMKTKTAAKYGL 70

  Fly    54 DSSPRLVDIIAAVPQDAKKILLPKLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGP 118
            .|.|||||||||||...:|||:|||:|||:|||||||||||||||||||||:.|||||:||||||
Mouse    71 ASQPRLVDIIAAVPPHYRKILIPKLKAKPVRTASGIAVVAVMCKPHRCPHISFTGNICIYCPGGP 135

  Fly   119 DSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEY 183
            |||||||||||||||||||||||:|||||||||||:|||||||||||||||||||||||.|||||
Mouse   136 DSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEY 200

  Fly   184 RDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIG 248
            ||||||:||||||||:|.|:.||::|||:|.|||:|||||||||||:|||:||||:|||||||||
Mouse   201 RDYFIRSLHDALSGHTSNNIHEAIKYSERSFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIG 265

  Fly   249 VQSVYEDVARDTNRGHTVRAVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFR 313
            ||||||||||||||||||:|.||||.|.||:|:|:|||||||||||..|||||||||:|||||||
Mouse   266 VQSVYEDVARDTNRGHTVKAACESFHLAKDSGFKVVTHMMPDLPNVGLERDIEQFIEFFENPAFR 330

  Fly   314 SDGLKIYPTLVIRGTGLYELWKTGRYKSYPPSMLVDLVAKILALVPPWTRVYRVQRDIPMPLVSS 378
            .||||:||||||||||||||||:|||:||.||.|::|||:|||||||||||||||||||||||||
Mouse   331 PDGLKLYPTLVIRGTGLYELWKSGRYRSYSPSDLIELVARILALVPPWTRVYRVQRDIPMPLVSS 395

  Fly   379 GVEHGNLRELALARMKDLGTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYED 443
            |||||||||||.|||||||..|||||||||||||||::||||::||:||||||||||||||||||
Mouse   396 GVEHGNLRELAFARMKDLGIQCRDVRTREVGIQEIHHRVRPYQVELVRRDYVANGGWETFLSYED 460

  Fly   444 PEQDILVGLLRLRKCSPDTFRPELKGECSIVRELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAE 508
            |:||||:|||||||||.:|||.||.|..|||||||||||||||::||||||||||||||||||||
Mouse   461 PDQDILIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAE 525

  Fly   509 RIAREEHGSTKLAVISGVGTRNYYRKMGYQLDGPYMSKSIE 549
            |||||||||.|:||||||||||||||:||:|.||||.|.::
Mouse   526 RIAREEHGSGKMAVISGVGTRNYYRKIGYRLQGPYMVKMLK 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp3NP_608834.1 ELP3 23..548 CDD:273503 439/524 (84%)
Elp3NP_001240741.1 ELP3 56..565 CDD:273503 424/498 (85%)

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