DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elp3 and Elp3

DIOPT Version :9

Sequence 1:NP_608834.1 Gene:Elp3 / 33649 FlyBaseID:FBgn0031604 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001240741.1 Gene:Elp3 / 74195 MGIID:1921445 Length:566 Species:Mus musculus


Alignment Length:561 Identity:449/561 - (80%)
Similarity:505/561 - (90%) Gaps:13/561 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KAKKKLGVG-------------LSRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGL 53
            |..|.:|.|             ||..|..:|.||::|::|::|||..|||:||:||:..|:||||
Mouse     6 KGAKYVGQGRKGGSGFSEITGDLSPAELMMLTIGDVIKQLVEAHEQGKDVDLNKMKTKTAAKYGL 70

  Fly    54 DSSPRLVDIIAAVPQDAKKILLPKLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGP 118
            .|.|||||||||||...:|||:|||:|||:|||||||||||||||||||||:.|||||:||||||
Mouse    71 ASQPRLVDIIAAVPPHYRKILIPKLKAKPVRTASGIAVVAVMCKPHRCPHISFTGNICIYCPGGP 135

  Fly   119 DSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEY 183
            |||||||||||||||||||||||:|||||||||||:|||||||||||||||||||||||.|||||
Mouse   136 DSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEY 200

  Fly   184 RDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIG 248
            ||||||:||||||||:|.|:.||::|||:|.|||:|||||||||||:|||:||||:|||||||||
Mouse   201 RDYFIRSLHDALSGHTSNNIHEAIKYSERSFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIG 265

  Fly   249 VQSVYEDVARDTNRGHTVRAVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFR 313
            ||||||||||||||||||:|.||||.|.||:|:|:|||||||||||..|||||||||:|||||||
Mouse   266 VQSVYEDVARDTNRGHTVKAACESFHLAKDSGFKVVTHMMPDLPNVGLERDIEQFIEFFENPAFR 330

  Fly   314 SDGLKIYPTLVIRGTGLYELWKTGRYKSYPPSMLVDLVAKILALVPPWTRVYRVQRDIPMPLVSS 378
            .||||:||||||||||||||||:|||:||.||.|::|||:|||||||||||||||||||||||||
Mouse   331 PDGLKLYPTLVIRGTGLYELWKSGRYRSYSPSDLIELVARILALVPPWTRVYRVQRDIPMPLVSS 395

  Fly   379 GVEHGNLRELALARMKDLGTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYED 443
            |||||||||||.|||||||..|||||||||||||||::||||::||:||||||||||||||||||
Mouse   396 GVEHGNLRELAFARMKDLGIQCRDVRTREVGIQEIHHRVRPYQVELVRRDYVANGGWETFLSYED 460

  Fly   444 PEQDILVGLLRLRKCSPDTFRPELKGECSIVRELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAE 508
            |:||||:|||||||||.:|||.||.|..|||||||||||||||::||||||||||||||||||||
Mouse   461 PDQDILIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAE 525

  Fly   509 RIAREEHGSTKLAVISGVGTRNYYRKMGYQLDGPYMSKSIE 549
            |||||||||.|:||||||||||||||:||:|.||||.|.::
Mouse   526 RIAREEHGSGKMAVISGVGTRNYYRKIGYRLQGPYMVKMLK 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp3NP_608834.1 ELP3 23..548 CDD:273503 439/524 (84%)
Elp3NP_001240741.1 ELP3 56..565 CDD:273503 424/498 (85%)
Radical_SAM 115..359 CDD:100105 207/243 (85%)
Radical_SAM_C 333..411 CDD:292816 67/77 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843009
Domainoid 1 1.000 366 1.000 Domainoid score I927
eggNOG 1 0.900 - - E1_COG1243
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7105
Inparanoid 1 1.050 933 1.000 Inparanoid score I349
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62148
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003595
OrthoInspector 1 1.000 - - oto94877
orthoMCL 1 0.900 - - OOG6_100741
Panther 1 1.100 - - LDO PTHR11135
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R392
SonicParanoid 1 1.000 - - X2945
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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