DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elp3 and elp3

DIOPT Version :9

Sequence 1:NP_608834.1 Gene:Elp3 / 33649 FlyBaseID:FBgn0031604 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001014344.2 Gene:elp3 / 541509 ZFINID:ZDB-GENE-050327-35 Length:548 Species:Danio rerio


Alignment Length:547 Identity:459/547 - (83%)
Similarity:508/547 - (92%) Gaps:2/547 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KAKKKLGVGLSRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAV 66
            |.|||  ..|||.|..::.|.::|::|::|||..||:|||::|:..::||||.:.||||||||||
Zfish     3 KPKKK--SDLSRAELMMMTIADVIKQLVEAHEEGKDINLNKVKTKTSAKYGLSAQPRLVDIIAAV 65

  Fly    67 PQDAKKILLPKLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTG 131
            |...::.|:|||:|||||||||||||||||||||||||:.|||||||||||||||||||||||||
Zfish    66 PPHYRRALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYTG 130

  Fly   132 YEPTSMRAIRSRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALS 196
            ||||||||||:||||:||||||||||||||||||||||||||||||.||||||||||||||||||
Zfish   131 YEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALS 195

  Fly   197 GHSSANVAEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTN 261
            ||:|.||.|||||||:|.|||:|||||||||||||||:||||.||||||||||||||||||||||
Zfish   196 GHTSNNVTEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTN 260

  Fly   262 RGHTVRAVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIR 326
            ||||||||||||.|.||||:|:|.|||||||||..|||:|||||:|||||||.||||:|||||||
Zfish   261 RGHTVRAVCESFHLAKDAGFKVVAHMMPDLPNVGMERDVEQFIEFFENPAFRPDGLKLYPTLVIR 325

  Fly   327 GTGLYELWKTGRYKSYPPSMLVDLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALA 391
            ||||||||||||||||.||.||||||:||||||||||||||||||||||||||||||||||||||
Zfish   326 GTGLYELWKTGRYKSYSPSALVDLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALA 390

  Fly   392 RMKDLGTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLR 456
            ||||:||.|||||||||||||||:|||||::|||||||||||||||||||||||||||:||||||
Zfish   391 RMKDMGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLR 455

  Fly   457 KCSPDTFRPELKGECSIVRELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLA 521
            :|||.:|||||||..|||||||||||||||::|||:|||||||||:||||||||||:||||:|||
Zfish   456 RCSPQSFRPELKGGVSIVRELHVYGSVVPVSSRDPSKFQHQGFGMMLMEEAERIARDEHGSSKLA 520

  Fly   522 VISGVGTRNYYRKMGYQLDGPYMSKSI 548
            ||||||||||||||||:|:||||.|::
Zfish   521 VISGVGTRNYYRKMGYELEGPYMVKNL 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp3NP_608834.1 ELP3 23..548 CDD:273503 450/524 (86%)
elp3NP_001014344.2 ELP3 37..547 CDD:273503 443/509 (87%)
Acetyl-CoA binding. /evidence=ECO:0000250|UniProtKB:A0A1C7D1B7 475..478 2/2 (100%)
Acetyl-CoA binding. /evidence=ECO:0000250|UniProtKB:A0A1C7D1B7 498..500 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587894
Domainoid 1 1.000 373 1.000 Domainoid score I844
eggNOG 1 0.900 - - E1_COG1243
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7105
Inparanoid 1 1.050 961 1.000 Inparanoid score I317
OMA 1 1.010 - - QHG62148
OrthoDB 1 1.010 - - D178537at33208
OrthoFinder 1 1.000 - - FOG0003595
OrthoInspector 1 1.000 - - oto40135
orthoMCL 1 0.900 - - OOG6_100741
Panther 1 1.100 - - LDO PTHR11135
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R392
SonicParanoid 1 1.000 - - X2945
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1615.840

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