DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elp3 and elp3

DIOPT Version :10

Sequence 1:NP_608834.1 Gene:Elp3 / 33649 FlyBaseID:FBgn0031604 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001001215.1 Gene:elp3 / 407885 XenbaseID:XB-GENE-957348 Length:549 Species:Xenopus tropicalis


Alignment Length:538 Identity:449/538 - (83%)
Similarity:503/538 - (93%) Gaps:0/538 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAVPQDAKKILLP 76
            |:.|..::.:.::|::|::|||..||||||::|:..::||||.:.|||||||||||...:|||:|
 Frog    12 SQAELMMMTVADVIKQLVEAHEQGKDVNLNKLKTKTSAKYGLSAQPRLVDIIAAVPPQYRKILVP 76

  Fly    77 KLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIR 141
            ||:||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
 Frog    77 KLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIR 141

  Fly   142 SRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEA 206
            :||||:||||||||||||||||||||||||||||||.|.|:|||:||||||||||||:|.:|:||
 Frog   142 ARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALSEDYRDFFIRNLHDALSGHTSNSVSEA 206

  Fly   207 VRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCE 271
            |||||:|.|||:|||||||||||||||:||||||||||||||||||||||||||||||||:||||
 Frog   207 VRYSERSNTKCVGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCE 271

  Fly   272 SFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKT 336
            ||.:.||||:|:|:|||||||||..|||.|||||:|||||||.||:|:|||||||||||||||||
 Frog   272 SFHMAKDAGFKVVSHMMPDLPNVGLERDTEQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKT 336

  Fly   337 GRYKSYPPSMLVDLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTTCR 401
            |||:||.||.||||||:|||||||||||||||||||||||||||||||||||||||||||||.||
 Frog   337 GRYRSYSPSTLVDLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTECR 401

  Fly   402 DVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFRPE 466
            |||||||||||||:|||||::|||||||||||||||||||||||||||:|||||||||..:||||
 Frog   402 DVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRKCSEQSFRPE 466

  Fly   467 LKGECSIVRELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVGTRNY 531
            |||..||||||||||||||:::|||:|||||||||||||||||||||||||.|:|||||||||||
 Frog   467 LKGGVSIVRELHVYGSVVPISSRDPSKFQHQGFGMLLMEEAERIAREEHGSCKIAVISGVGTRNY 531

  Fly   532 YRKMGYQLDGPYMSKSIE 549
            |||:||:|:||||.|.::
 Frog   532 YRKLGYELEGPYMVKKLD 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp3NP_608834.1 ELP3 23..548 CDD:273503 447/524 (85%)
elp3NP_001001215.1 ELP3 39..548 CDD:273503 439/508 (86%)

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