DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elp3 and elp3

DIOPT Version :10

Sequence 1:NP_608834.1 Gene:Elp3 / 33649 FlyBaseID:FBgn0031604 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_594862.1 Gene:elp3 / 2541614 PomBaseID:SPAC29A4.20 Length:544 Species:Schizosaccharomyces pombe


Alignment Length:527 Identity:395/527 - (74%)
Similarity:460/527 - (87%) Gaps:3/527 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAVPQDA--KKILLPKLRAKPIRT 85
            ||:.||:.:....|.:|||.:|..::.|:.|..||||.|||||:|.||  |:.|:.||||||:||
pombe    16 EIVAELIASENQNKVINLNALKMRISKKHQLSESPRLTDIIAAIPPDAYLKESLMRKLRAKPVRT 80

  Fly    86 ASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQT 150
            |||||||||||||||||||.||||:|||||||||||||||||||||||||||||||:||||:.|.
pombe    81 ASGIAVVAVMCKPHRCPHIAMTGNVCVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA 145

  Fly   151 RHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRT 215
            |.|||||:.|||:|||||:|:||||||.|||.||..||.|||:||||.::.::.|||::||:|.|
pombe   146 RGRVEQLRSLGHTVDKVEYIIMGGTFMSLPESYRHTFIANLHNALSGATTEDLDEAVKFSEQSET 210

  Fly   216 KCIGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDAG 280
            ||:||||||||||||.:|:.:||.|||||||||||||||||||||||||||:||||:|||.||.|
pombe   211 KCVGITIETRPDYCLDQHLDEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFQLAKDTG 275

  Fly   281 YKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRYKSYPPS 345
            ||:|||||||||||..||||.||.|||||||||:||||:|||||||||||||||||||||:|.|:
pombe   276 YKVVTHMMPDLPNVGMERDIFQFQEYFENPAFRTDGLKLYPTLVIRGTGLYELWKTGRYKNYTPN 340

  Fly   346 MLVDLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTTCRDVRTREVGI 410
            .||||:|:||||||||||:||:||||||||||||||.||||||||.||:||||.|||:|.||||:
pombe   341 ALVDLIARILALVPPWTRIYRIQRDIPMPLVSSGVETGNLRELALNRMRDLGTKCRDIRAREVGM 405

  Fly   411 QEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFRPELKGE-CSIV 474
            ||:|:|:.|.::||:||||.||||||||||||||:||||:||||||:||..|:|||...: .|:|
pombe   406 QEVHHKIHPEQVELLRRDYTANGGWETFLSYEDPKQDILIGLLRLRQCSDKTYRPEFTSQPTSLV 470

  Fly   475 RELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVGTRNYYRKMGYQL 539
            ||||||||.|||::|||.||||||||.||:|||||||:.||||.|::||||||.|.||:|:||.|
pombe   471 RELHVYGSAVPVHSRDPKKFQHQGFGTLLLEEAERIAKYEHGSKKISVISGVGVRKYYQKLGYTL 535

  Fly   540 DGPYMSK 546
            |||||||
pombe   536 DGPYMSK 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp3NP_608834.1 ELP3 23..548 CDD:273503 395/527 (75%)
elp3NP_594862.1 ELP3 16..544 CDD:273503 395/527 (75%)

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