DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elp3 and elpc-3

DIOPT Version :9

Sequence 1:NP_608834.1 Gene:Elp3 / 33649 FlyBaseID:FBgn0031604 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_506055.2 Gene:elpc-3 / 179669 WormBaseID:WBGene00014123 Length:547 Species:Caenorhabditis elegans


Alignment Length:537 Identity:426/537 - (79%)
Similarity:476/537 - (88%) Gaps:2/537 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ERQVL--VIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAVPQDAKKILLPK 77
            :|.:|  .|.||::.|::||..||||||||:|.:||.|.||...|:||||||.||.|.|..||||
 Worm     7 QRALLAQTINEIVKLLIEAHNQKKDVNLNRLKCIVAQKNGLSFQPKLVDIIAGVPSDYKDSLLPK 71

  Fly    78 LRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRS 142
            |:|||:||||||||||||.|||||||||.|||||||||||||||||||||||||||||||||||:
 Worm    72 LKAKPVRTASGIAVVAVMSKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRA 136

  Fly   143 RYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEAV 207
            ||:|:||||.|:.||.|||||||||||||||||||.|||:|||:||||||||||||:||:|.|||
 Worm   137 RYNPYLQTRGRLNQLMQLGHSVDKVEFIVMGGTFMSLPEDYRDFFIRNLHDALSGHTSASVEEAV 201

  Fly   208 RYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCES 272
            .|||:|:.|||||||||||||||.||::|||.||||||||||||.||||||||||||||::|||:
 Worm   202 AYSERSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCET 266

  Fly   273 FQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTG 337
            |.:.||.|||:|.|||||||||..|||.|||:|.||:||||.||||:||||||||||||||||||
 Worm   267 FHMAKDTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTG 331

  Fly   338 RYKSYPPSMLVDLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTTCRD 402
            ||:|||||:||||:|.||:|||||||||||||||||||||||||||||||.|:|:||:||..|||
 Worm   332 RYQSYPPSVLVDLIATILSLVPPWTRVYRVQRDIPMPLVSSGVEHGNLREHAMAKMKELGLKCRD 396

  Fly   403 VRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFRPEL 467
            |||||||||||||||||.::|||||||.||||||||:|||||:||||:|||||||.|....||||
 Worm   397 VRTREVGIQEIHNKVRPEDVELIRRDYTANGGWETFISYEDPKQDILIGLLRLRKISDKAHRPEL 461

  Fly   468 KGECSIVRELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVGTRNYY 532
            ||..|:|||||||||||.|..|||.||||||:|.||||||||||||||||.|:|||||||||.||
 Worm   462 KGNVSVVRELHVYGSVVSVADRDPKKFQHQGYGSLLMEEAERIAREEHGSDKIAVISGVGTREYY 526

  Fly   533 RKMGYQLDGPYMSKSIE 549
            ||:||:||||||||.::
 Worm   527 RKLGYELDGPYMSKMLD 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp3NP_608834.1 ELP3 23..548 CDD:273503 423/524 (81%)
elpc-3NP_506055.2 ELP3 17..542 CDD:273503 423/524 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162636
Domainoid 1 1.000 335 1.000 Domainoid score I598
eggNOG 1 0.900 - - E1_COG1243
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7105
Inparanoid 1 1.050 881 1.000 Inparanoid score I201
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62148
OrthoDB 1 1.010 - - D178537at33208
OrthoFinder 1 1.000 - - FOG0003595
OrthoInspector 1 1.000 - - oto18275
orthoMCL 1 0.900 - - OOG6_100741
Panther 1 1.100 - - LDO PTHR11135
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R392
SonicParanoid 1 1.000 - - X2945
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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