DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dim1 and txnl4b

DIOPT Version :9

Sequence 1:NP_608830.3 Gene:Dim1 / 33645 FlyBaseID:FBgn0031601 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001016338.1 Gene:txnl4b / 549092 XenbaseID:XB-GENE-5780903 Length:149 Species:Xenopus tropicalis


Alignment Length:143 Identity:51/143 - (35%)
Similarity:90/143 - (62%) Gaps:2/143 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPACMKMDEVMYSIAEKVKNFAVIYLVDITE 65
            ||::||.|.:...||.||.:..::|:|:|||.|.|..|:::|:::...:..:...|.||:||:.:
 Frog     1 MSFLLPKLSSKRDVDHAIKTTSEKVLVLRFGRDEDHVCLQLDDILSKTSHDLSKMATIYIVDVDK 65

  Fly    66 VPDFNKMYEL-YDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIVETVYRGARKGRGL 129
            ||.:.:.::: |.|.|: |||..:|:.:|.|:.::.|.....:.||:.||::|.:||||.:|:.:
 Frog    66 VPVYTRYFDISYIPSTI-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLI 129

  Fly   130 VVSPKDYSTKYRY 142
            |.||.|.....||
 Frog   130 VQSPIDPQNIPRY 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dim1NP_608830.3 PLN00410 1..142 CDD:215109 49/141 (35%)
txnl4bNP_001016338.1 DLP 10..123 CDD:239284 37/113 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1320693at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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