DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dim1 and Txnl4b

DIOPT Version :10

Sequence 1:NP_608830.3 Gene:Dim1 / 33645 FlyBaseID:FBgn0031601 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001013913.1 Gene:Txnl4b / 292008 RGDID:1305127 Length:149 Species:Rattus norvegicus


Alignment Length:136 Identity:53/136 - (38%)
Similarity:90/136 - (66%) Gaps:2/136 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPACMKMDEVMYSIAEKVKNFAVIYLVDITE 65
            ||::||.|.:..:|||||.|..::|:|:|||.|.||.|:::|:::...:..:...|.|||||:.:
  Rat     1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSADLSKMATIYLVDVDQ 65

  Fly    66 VPDFNKMYEL-YDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIVETVYRGARKGRGL 129
            .|.:.:.::: |.|.|| |||..:|:.:|.|:.::.|.....:.||:.||::|.:||||.:|:.:
  Rat    66 TPVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLI 129

  Fly   130 VVSPKD 135
            |.||.|
  Rat   130 VQSPID 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dim1NP_608830.3 PLN00410 1..142 CDD:215109 53/136 (39%)
Txnl4bNP_001013913.1 DLP 10..123 CDD:239284 41/113 (36%)

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