DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3652 and AT2G18840

DIOPT Version :10

Sequence 1:NP_608828.2 Gene:CG3652 / 33643 FlyBaseID:FBgn0031600 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_565442.1 Gene:AT2G18840 / 816399 AraportID:AT2G18840 Length:281 Species:Arabidopsis thaliana


Alignment Length:214 Identity:71/214 - (33%)
Similarity:115/214 - (53%) Gaps:22/214 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSLEGDMSIPGKRTTTATSASGVPEYNTLDEPIRETVLRDIRAVGIKFYHVLYP----KEKSSLL 75
            |::....:..|      .||.|.|. |||.||:.:||.||:..:......|::|    ::....|
plant    86 PAVSNSSNFQG------ASAFGSPP-NTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKAL 143

  Fly    76 RDWDLWGPLVLCTFMATILQGSSTADSMSDNGPEFAQVFVIVWIGAAVVTLNSKLLGGNISFFQS 140
            ||||||||.....|:...|..|::.    .....||..|.::..||.::|||..||||:|.||||
plant   144 RDWDLWGPFFFIVFLGLTLSWSASV----KKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQS 204

  Fly   141 VCVLGYCLTPVAISLIVCRVILLATQTRLLFFLRFVTTTIGFAWATYASFVFLGQSQPPHRKPLA 205
            :.:|||||.|:.:..::|   :|....    .|:.|..::..||:::|::.|:..:..|.||.||
plant   205 LSLLGYCLFPLDVGAVIC---MLKDNV----ILKMVVVSVTLAWSSWAAYPFMSSAVNPRRKALA 262

  Fly   206 VYPIFLFFFIISWLVLSHN 224
            :||:||.:..:.:|:::.|
plant   263 LYPVFLMYVSVGFLIIAIN 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3652NP_608828.2 YIP1 <31..221 CDD:481248 68/193 (35%)
AT2G18840NP_565442.1 YIP1 89..278 CDD:481248 69/206 (33%)

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