DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tps1 and TPS10

DIOPT Version :9

Sequence 1:NP_608827.1 Gene:Tps1 / 33642 FlyBaseID:FBgn0027560 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_001322702.1 Gene:TPS10 / 842309 AraportID:AT1G60140 Length:861 Species:Arabidopsis thaliana


Alignment Length:865 Identity:239/865 - (27%)
Similarity:387/865 - (44%) Gaps:178/865 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IVVSNRLPFVLIRDPKTDE----LERRASAGGLVTAVCPVVIKGSGLWVGWSGIHLKDPNEAIPE 81
            |:|:|.||....:|.:|.:    |:..:....|.....|   :...::||....|: |.:|    
plant    62 IIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSP---ETEVIYVGSLKTHV-DVSE---- 118

  Fly    82 SNPNDQTPTAGLKSEQVVSVNIDSKIFDSYYNGCCNKIFWPLFHSMPGRANFGGEH-----WHDY 141
               .|:......:....|:..:...:...:|.|.|.:..|||||.|.......||.     |..|
plant   119 ---QDEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180

  Fly   142 VTVNKHFA--VRTIEALEKCLAKNQGSEKSPPIVWIHDYHLMLAANWVREHAEEKNLPCRLAFFL 204
            |:.||.||  |..:..||:            ..:||||||||:...::|.....    .:|.|||
plant   181 VSANKIFADKVMGVINLEE------------DYIWIHDYHLMVLPTFLRRRFHR----VKLGFFL 229

  Fly   205 HIPFPPWDIFRLLPWSDEILQGMLGCDLVGFHIQDYCLNFVDCCQRNLGCRVD--RNNLLVEHGG 267
            |.|||..:|:|.||..:|:|:|:|.|||:|||..||..:|:.||.|.||...:  |.::.:::.|
plant   230 HSPFPSSEIYRTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLG 294

  Fly   268 RTVRVRPLPIGI---PYERFVNLATTAPKVLKTSK----MQIILGVDRLDYTKGLVHRLMAFEAL 325
            |||.::.|||||   ..|..:||..||.|:.:..:    .:||||||.:|..|||..:::|||.|
plant   295 RTVFLKILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHL 359

  Fly   326 LLKYPQHKEKVSLLQISVPSRTDVKEYRELKEEVDQLVGRINGRFTTANWAPIRYIYDYVSQDEL 390
            |.:||....|:.|:||..|:|...|:.:|.::|....|.|||.|:.:.::.|:..|...|.:.|.
plant   360 LQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVPRFEK 424

  Fly   391 AALYRDAAVCLVTPLRDGMNLVAKEFVACQ-----INEVPGV---------LVISPFAGAGEMMH 441
            :|.|..|..|:|..:|||||||..::..|:     :|:..||         ||:|.|.|....:.
plant   425 SAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSEFIGCSPSLS 489

  Fly   442 EALLCNPYEVNEAAEVIHRALTMPEDERVLRMARLRRREAECDVSHWMRCFLK------------ 494
            .|:..||::|:..|:.::.|:||.:.|:.||..:.....:..||.:|.|.|.:            
plant   490 GAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSFSQDLERASRDHYSK 554

  Fly   495 ---AVG--------ALEMDDVGTTIMQPVSVDDFDDYLLKYIGY--NHKLALLLDYDGTLAP--- 543
               .||        ||..:....:|.|.||            .|  :.|.|:.|||||||.|   
plant   555 RCWGVGWGLGFRLVALSPNFRRLSIEQTVS------------AYRRSSKRAIFLDYDGTLVPETS 607

  Fly   544 IAPHPDLATLSPEIKNVLYKLSNHSDVYVAVISGRNVDNVKK-MVGIEGITYAGNHG-------- 599
            |...|     |.|:.:.|..|.:..:..:.::|||...::.: :...|.:..|..||        
plant   608 IVKDP-----SAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGYFTRWNKS 667

  Fly   600 ----LEILHPDGSKFVHPMPMEYEKKVSDLLKALQDSVCRDGAWVENKGALLTFHY--------- 651
                ...|..|         :|::|.|..:::...::.  ||:.:|.|.:.|.:|:         
plant   668 SDWETSGLSDD---------LEWKKVVEPIMRLYTETT--DGSNIEAKESALVWHHQDADPDFGS 721

  Fly   652 ---RETPNHLRGAMVDKARSLIEKYGFKATEAHCALEARPPVQWNKGRASIYI----LRTSFGVD 709
               :|..:||...:|::  .:|...|      |..:|.:|. ..:||..:..|    |......|
plant   722 CQAKELLDHLETVLVNE--PVIVNRG------HQIVEVKPQ-GVSKGLVTGKILSRMLEDGIAPD 777

  Fly   710 WNERIKIIYVGDDLTDEDAMVALKGMARTFRVTSSDI---VKTAADHRLPS-----TDSVYTLLK 766
            :     ::.:|||.:||:   ..:.::.|....||.:   :......|.||     .|.|..::|
plant   778 F-----VVCIGDDRSDEE---MFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVK 834

  Fly   767 WVERHFMGRKARANSLTYRP 786
            .::       ..||:.:.:|
plant   835 LLQ-------GLANTSSPKP 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tps1NP_608827.1 GT1_TPS 19..495 CDD:99963 165/522 (32%)
PRK14501 20..766 CDD:184712 235/843 (28%)
HAD_like 530..770 CDD:304363 62/279 (22%)
TPS10NP_001322702.1 PLN02205 1..843 CDD:177855 238/859 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 281 1.000 Domainoid score I392
eggNOG 1 0.900 - - E1_COG1877
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 298 1.000 Inparanoid score I792
OMA 1 1.010 - - QHG54965
OrthoDB 1 1.010 - - D772297at2759
OrthoFinder 1 1.000 - - FOG0000556
OrthoInspector 1 1.000 - - otm2519
orthoMCL 1 0.900 - - OOG6_100616
Panther 1 1.100 - - O PTHR10788
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X473
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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