DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and CG5245

DIOPT Version :9

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster


Alignment Length:546 Identity:138/546 - (25%)
Similarity:206/546 - (37%) Gaps:161/546 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LEDHPANNDVIIIQDSVAEEELPVIKEEAIEGEDLQGEYFIITECLE----EPAIGSCRVCLEQS 194
            ::|.|...|..       ||||..|...  :.|:|:.|..|...|..    ||.           
  Fly    11 VKDEPPQEDTF-------EEELIFISNS--DFEELESEIKIENFCSYGKDLEPV----------- 55

  Fly   195 DNLTNIFDDAHQYGIP--IATILSQYT-GMPVEK-GDSFSEYICVTCLDVVKNAFDDLESKENTI 255
                        .|:|  :.|..|:.. ..|:.| .|:|.   |..|    :..|...|:.|:.:
  Fly    56 ------------KGVPSKLKTCKSKIAKKRPLRKQTDTFK---CTQC----QKTFTRKENLESHL 101

  Fly   256 QMYRQP------------------KEEIIDIDSIPVK----------NKPVD---YEVTGKPPHR 289
            :::.:.                  |..::..:..|.|          |..:.   :|.||:.|.:
  Fly   102 RLHAEERPFECSHCSKSFGRRTHYKRHLLKHEKRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFK 166

  Fly   290 CPQCPKIFLLAAKLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELE 354
            |.||...|...:.||.|:|||:|.|..|     |..|...:.....|:.|:..|:.:        
  Fly   167 CTQCSTSFARKSHLQVHLRTHSEERPFE-----CTHCEKAFKNNSHLQEHLRTHQEA-------- 218

  Fly   355 PPYRCPHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAGERT 419
            .|::|.||.|.|...|.|:.|:.||.:        .|.||.||...|....||:.|:::||||..
  Fly   219 RPFKCSHCSKSFKLRSILQKHLLTHAE--------RSFKCTQCPKTFLQNDSLQIHLRVHAGEDP 275

  Fly   420 FKCPLCLMSFQEESNLKSH-------------DCA---------------HTR---FKCHKCSKF 453
            ||||.|..:|...|.|:.|             .|:               |||   :||.:|||.
  Fly   276 FKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKS 340

  Fly   454 FESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEH--------------------ISSQVC 498
            |..:::|..| ::.||.:.||||..|.:.|:.|..|:.|                    :|||:.
  Fly   341 FFKKSHLVEH-QQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLL 404

  Fly   499 VQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKKVKTVIERHNCTQCKKSYQNKKLLTKHIL 563
            |.........| |.||.|.|.::......||..||    |......|:.|.|.:.......:|:.
  Fly   405 VHLQEHTGKNQ-FECPHCSKSYTTSSTLHMHLRTH----TGELPFKCSHCSKLFARSAEHQEHLR 464

  Fly   564 SHN-----RCVHCSMSFTSKYLLEQH 584
            :|.     :|.|||..:|.|..|.:|
  Fly   465 THTGEKPYKCSHCSTRYTQKSSLGRH 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 10/62 (16%)
C2H2 Zn finger 290..310 CDD:275368 8/19 (42%)
C2H2 Zn finger 323..343 CDD:275370 4/19 (21%)
zf-C2H2_8 356..438 CDD:292531 32/81 (40%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..438 CDD:275368 6/15 (40%)
C2H2 Zn finger 447..463 CDD:275368 6/15 (40%)
C2H2 Zn finger 476..505 CDD:275368 10/48 (21%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 4/19 (21%)
C2H2 Zn finger 568..584 CDD:275368 7/15 (47%)
CG5245NP_650197.1 COG5048 74..478 CDD:227381 113/437 (26%)
C2H2 Zn finger 84..104 CDD:275368 5/23 (22%)
C2H2 Zn finger 112..132 CDD:275368 1/19 (5%)
C2H2 Zn finger 139..159 CDD:275368 1/19 (5%)
C2H2 Zn finger 167..187 CDD:275368 8/19 (42%)
zf-H2C2_2 179..204 CDD:290200 11/29 (38%)
C2H2 Zn finger 195..215 CDD:275368 4/19 (21%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 1/19 (5%)
C2H2 Zn finger 334..354 CDD:275368 7/20 (35%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 4/19 (21%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 4/19 (21%)
C2H2 Zn finger 474..492 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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