DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17612 and CG8319

DIOPT Version :9

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster


Alignment Length:380 Identity:94/380 - (24%)
Similarity:151/380 - (39%) Gaps:90/380 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 CRVCLEQSDNLTNIFDD-AHQY--GIPIATILSQYTGMPVEKGDSFSEYICVTCLDVVKNAFD-D 247
            ||:|...|:|:..|||| ..:|  |..:|.::.....:.::..|:..:.:|::|:...:.|:. .
  Fly     5 CRICGGASENMLGIFDDQVEEYVDGAKLAEMVKTCADVQLDPDDAMPQKMCISCVHDARTAYGFK 69

  Fly   248 LESKENTIQMY----------RQPKEEII------DIDSIPVK---NKPV--------------- 278
            ...:||..:.|          .:|.||..      |..::..|   ||.:               
  Fly    70 RRCEENYKKFYLAILNGQVIKDEPNEEDFLFIENPDKGNLEAKKKLNKEIKKTHQTASRTTKSSI 134

  Fly   279 ---------------------------------DYEVTGKPPHRCPQCPKIFLLAAKLQAHIRTH 310
                                             |:.......|.|..|.:.||..|.|..|....
  Fly   135 TTSRAGRQLRSIKNQTFKCELCIKQFKRQINLLDHMKVHSNSHVCQNCEERFLFKADLDNHQCYR 199

  Fly   311 NETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLFLYSSFLEIH 375
            |...|.|     ||.|..::.....|::    |:..|.:|   ..|::||||.:.|.....|:.|
  Fly   200 NSNSTVE-----CPECLKVFSSTQSLDS----HKCKDMQE---RSPFQCPHCQQAFTREQNLKAH 252

  Fly   376 IQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAGERTFKCPLCLMSFQEESNLKSHDC 440
            :..|.:..|   ....|||:.|...|.:.|:||.|:..|.|||...||.|:.:|:.:..||.|..
  Fly   253 LLIHAESKQ---GNGPHKCSYCQTGFFNKSALKVHIHAHMGERPHACPFCVSNFRSKQALKVHIR 314

  Fly   441 AHT---RFKCHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEH 492
            .||   .::|..|.|.|...|.|..| ::.|:.:.|:||..|.|.|::::.||.|
  Fly   315 IHTGEKPYQCPHCPKTFSDNNNLAKH-RRRHSDERPYKCSICLQDFREKHHLKRH 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 16/61 (26%)
C2H2 Zn finger 290..310 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275370 4/19 (21%)
zf-C2H2_8 356..438 CDD:292531 29/81 (36%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..438 CDD:275368 6/15 (40%)
C2H2 Zn finger 447..463 CDD:275368 6/15 (40%)
C2H2 Zn finger 476..505 CDD:275368 7/17 (41%)
C2H2 Zn finger 513..533 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 568..584 CDD:275368
CG8319NP_649920.2 zf-AD 4..79 CDD:285071 18/73 (25%)
COG5048 <153..368 CDD:227381 67/230 (29%)
C2H2 Zn finger 153..173 CDD:275368 1/19 (5%)
C2H2 Zn finger 179..196 CDD:275368 6/16 (38%)
C2H2 Zn finger 207..227 CDD:275370 5/23 (22%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-H2C2_2 308..332 CDD:290200 8/23 (35%)
zf-C2H2 322..344 CDD:278523 7/22 (32%)
C2H2 Zn finger 324..344 CDD:275368 7/20 (35%)
C2H2 Zn finger 352..368 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449778
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006715
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.030

Return to query results.
Submit another query.