DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and CG8301

DIOPT Version :10

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster


Alignment Length:658 Identity:142/658 - (21%)
Similarity:228/658 - (34%) Gaps:195/658 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSVKRGGSLPKTLCLQCLHMDTFGTKHKGPRPETQINDKVHLEMSING------EDGLPEHPLYP 72
            |.:.....||:.:|..|.      ||.                .|||.      |..|....:|.
  Fly    50 LKISPNDGLPQKICSDCF------TKF----------------CSINAFRLACQEAQLKLSHIYD 92

  Fly    73 EVQLVVKEEDALIKKKVIEENHIHNE-EIIGASNIVDVEVHENHRANNDVILIQDSFAEEVILED 136
            ::.....|:|. |.::.:|....|.| |....:..|..|...|:.|::.:.:..|:.        
  Fly    93 KIDASSLEDDE-IGQEDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAV-------- 148

  Fly   137 HPANNDVIIIQDSVAEEELPVIKEEAIEGEDLQGEYFIITECLEEPAIG-----------SCRVC 190
                 |:    |...|||         |.|:.|.:|   .|.:|||...           :|:.|
  Fly   149 -----DI----DEAEEEE---------EEEEQQQQY---DEEVEEPITDESAPPQLTISYACKFC 192

  Fly   191 LEQSDNLTNIFDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDVVKNAFDDLESKENTI 255
            |...:|            ..:..:|.::..   ...|....|.|..|    :..|.|..|:    
  Fly   193 LRPQEN------------YQLQQLLLEHIN---ASHDPEQPYNCPEC----EARFQDAASR---- 234

  Fly   256 QMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPPHRCPQCPKIFLLAAKLQAHI-RTHNETRTTEPP 319
                          ::.:|:..|:.:      |.|..|.|.:.....|:.|: :.|:||      
  Fly   235 --------------TVHLKSSHVEKQ------HACGVCGKKYGDRHNLRHHVEKYHSET------ 273

  Fly   320 RLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPH--CPKLFLYSSFLEIHIQTHEDV 382
            ..:|.:|...:..|..|..||..|  :.:|:      ::|.|  |.:||:....|..|..||...
  Fly   274 DFECALCEKRFYTRKSLNYHMKWH--NPDRQ------FKCRHSGCERLFISQRHLMCHEATHSGT 330

  Fly   383 SQRLSRKSSHKCAQCADVFSDVSSLKDHV-KIHAGERTFKCPLCLMSFQEESNLKSHD------- 439
            |   ||||.| |..|...|..:.:|:.|: :.|.||:.:||..|...|...:..:.|.       
  Fly   331 S---SRKSEH-CGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHREN 391

  Fly   440 -CAHTRFKCHKCSKFFESQNYLDFHFKKSHTTK----------------------GPFKCIKCQQ 481
             .|..|.:|..|.:.|.|:..|..|....|..:                      |.|:|..|.|
  Fly   392 LTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQ 456

  Fly   482 TFQKRNGLKEHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKKVKTVIERHNCT 546
            .|..::.|:.|.:..        ....:...||.|.|:|....:.:.|..||:|.|..:    |.
  Fly   457 RFNMKSALERHAAVH--------SEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNV----CD 509

  Fly   547 QCKKSYQNKKLLTKHILSHN------RCVHCSMSFTSKYLLEQHTCSQSYQLNGSRGRKNPNLNY 605
            .|.|::..|.:||:|.|||.      :|..|..::..:..|..|.            |.:....|
  Fly   510 VCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQ------------RTHTGKTY 562

  Fly   606 NECEESNE 613
            .:|:...|
  Fly   563 YKCDLCQE 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 9/58 (16%)
C2H2 Zn finger 290..310 CDD:275368 5/20 (25%)
C2H2 Zn finger 323..343 CDD:275370 6/19 (32%)
C2H2 Zn finger 359..379 CDD:275368 7/21 (33%)
C2H2 Zn finger 394..414 CDD:275368 5/20 (25%)
C2H2 Zn finger 422..438 CDD:275368 3/15 (20%)
C2H2 Zn finger 447..463 CDD:275368 5/15 (33%)
C2H2 Zn finger 476..505 CDD:275368 6/28 (21%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 8/19 (42%)
C2H2 Zn finger 568..584 CDD:275368 3/15 (20%)
CG8301NP_649915.1 zf-AD 3..88 CDD:462262 12/59 (20%)
COG5048 198..>508 CDD:227381 83/382 (22%)
C2H2 Zn finger 221..241 CDD:275368 6/41 (15%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 7/21 (33%)
C2H2 Zn finger 338..359 CDD:275368 5/20 (25%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
SUF4-like 536..>586 CDD:411020 8/47 (17%)
C2H2 Zn finger 537..558 CDD:411020 5/32 (16%)
C2H2 Zn finger 537..557 CDD:275368 5/31 (16%)
C2H2 Zn finger 565..586 CDD:411020 2/6 (33%)
C2H2 Zn finger 565..582 CDD:275368 2/6 (33%)

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