DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and kipf

DIOPT Version :10

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_649750.1 Gene:kipf / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster


Alignment Length:469 Identity:115/469 - (24%)
Similarity:175/469 - (37%) Gaps:126/469 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 CRVCLEQSDNLTNIFDDAH-----QYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDVVKNAFD 246
            ||.|::::..|.:||.:..     :..:.::.||::.|..||::||...::|||:|:..|:|||.
  Fly     9 CRTCMDETGTLVDIFANVRDPVLDEPEMSLSHILARCTERPVKRGDLLPQFICVSCVLAVQNAFR 73

  Fly   247 DLESKENTIQMY-------------------RQPKEEII------------DIDSIPVKNKPVDY 280
            .....|.:.|.:                   ...|.:||            |...:....|| |.
  Fly    74 FKWQSEQSYQHFFRVLNQSGAPENQVHLAACNGDKNQIINQKMQLKSDRQQDTQQMTKTQKP-DD 137

  Fly   281 EVTGKPPHRCPQCPKIFLLAAKLQ-AHIRTHNETRTTEPPRLKC------PMCPSIYMKRGCLEA 338
            :::.|.           .|.|||| .:|....|:.|..|.:..|      .|.|.        ||
  Fly   138 DLSQKQ-----------TLQAKLQEGNIDGPPESFTLHPRKRTCRTEEQADMIPK--------EA 183

  Fly   339 HMWIHRASDERESELEPPYRCPHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSD 403
                 ..|.:...:.:..|.||||.|.|...:.|..||   .|:..|        |..|...:..
  Fly   184 -----TRSTKMICDADGYYNCPHCSKRFCSQTQLRTHI---TDLCNR--------CPYCPRTYMQ 232

  Fly   404 VSSLKDHVKIHAGERTFKCPLCLMSFQEESNLKSHDCAHTR---FKCHKCSKFFESQNYLDFHFK 465
            .|:||.|::.|..:...||..|..:|..:.:||.|...|..   ..|.:||..|.....|:.|.:
  Fly   233 KSNLKRHLRNHLSKPAHKCFHCSKAFMRKDHLKRHLRTHDSDGPLSCSQCSAVFIEHVQLEIHRR 297

  Fly   466 ---------KSHTTKGP-------FKCIKCQQTFQKRNGLKEHISSQVCVQFLRSKSPGQIFP-- 512
                     ||.:||.|       .:.:|.:.|....||        .|      ..|..:.|  
  Fly   298 EHKQRPGSSKSESTKDPDSDDSDQAQDLKPKWTKNTFNG--------TC------SIPPMLKPKP 348

  Fly   513 -CPKCPKKFSIEDNYQMHHATHKKVKTVIERH--NCTQCKKSYQNKKLLTKHILSHN----RCVH 570
             |..|.||||.....:.|..||.:     :.|  .||.|.:.::.:|.|.:|...|.    ||..
  Fly   349 ICDICQKKFSSVYALKRHMLTHNR-----QHHLKKCTYCSEEFKTEKHLKRHERGHMGDLFRCEF 408

  Fly   571 CSMSFTSKYLLEQH 584
            ||:.|.....|.:|
  Fly   409 CSLVFVDVNYLRKH 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 20/63 (32%)
C2H2 Zn finger 290..310 CDD:275368 6/20 (30%)
C2H2 Zn finger 323..343 CDD:275370 5/25 (20%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 394..414 CDD:275368 6/19 (32%)
C2H2 Zn finger 422..438 CDD:275368 5/15 (33%)
C2H2 Zn finger 447..463 CDD:275368 5/15 (33%)
C2H2 Zn finger 476..505 CDD:275368 5/28 (18%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
C2H2 Zn finger 545..565 CDD:275368 6/19 (32%)
C2H2 Zn finger 568..584 CDD:275368 5/15 (33%)
kipfNP_649750.1 zf-AD 8..75 CDD:462262 21/65 (32%)
COG5048 220..>284 CDD:227381 18/71 (25%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
C2H2 Zn finger 379..399 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..427 CDD:275368 6/17 (35%)

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