DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and CG11247

DIOPT Version :9

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:474 Identity:106/474 - (22%)
Similarity:184/474 - (38%) Gaps:129/474 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 RANNDVILIQDSFAEEVILEDHPANNDVIIIQDSVAEEEL-PVIKEEAIEGEDLQGEYFIITECL 179
            |..:.:..::|:..:|.  ||....      |||..::.: |.:|:.|.:||.::.::.:.::|.
  Fly    43 RRKSSLASLRDACVDEE--EDDGGE------QDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCS 99

  Fly   180 EEPAIGS----CRVCLEQSDNLTNIFDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDV 240
            :|  .|.    .|..|..||      :..|:                              |.|.
  Fly   100 KE--FGGKTDLQRHMLIHSD------ERPHK------------------------------CKDC 126

  Fly   241 VKNAFDDLESKENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPPHR----CPQCPKIFLLAA 301
            .|:              |||         ::.:||     .:|....||    |.||||.|.|..
  Fly   127 GKS--------------YRQ---------AVNLKN-----HITTAHEHRKQFVCSQCPKSFALKE 163

  Fly   302 KLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLF 366
            :|:.|:|.|    :.|.| ..|.:|...:.:.|.|:.||..|..:..::      :.|..|...|
  Fly   164 RLRLHMRLH----SGEKP-YPCDLCDKKFARGGQLQQHMVSHHKTSIQQ------FNCTKCSASF 217

  Fly   367 LYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHV-KIHAGERTFKCPLCLMSFQ 430
            ..::.|.:|::.||       :...|:|:.|.:.|::..:|:.|: :.|.....|:|.:|....:
  Fly   218 STNANLRVHMERHE-------QGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIE 275

  Fly   431 EESNLKSHDCAHTRFK---CHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEH 492
            .:.:|.:|...||..|   |..|:.:|..::..:.|. :.||.:.|::|..|.|||...:.||.|
  Fly   276 PDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHM-RMHTGERPYQCRICHQTFAHSSVLKLH 339

  Fly   493 ISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATH-----KKVKTVIERHNCTQCKKSY 552
            |         |..:..:.|.|..|      ||........|     ||:....:.:.|..|...:
  Fly   340 I---------RKHTGEKPFRCQLC------EDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFF 389

  Fly   553 QNKKLLTKHILSHNRCVHC 571
            :.|..|..|:   ..|..|
  Fly   390 KIKVELQSHV---EHCAKC 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 8/58 (14%)
C2H2 Zn finger 290..310 CDD:275368 10/19 (53%)
C2H2 Zn finger 323..343 CDD:275370 6/19 (32%)
zf-C2H2_8 356..438 CDD:292531 18/82 (22%)
C2H2 Zn finger 359..379 CDD:275368 5/19 (26%)
C2H2 Zn finger 394..414 CDD:275368 5/20 (25%)
C2H2 Zn finger 422..438 CDD:275368 3/15 (20%)
C2H2 Zn finger 447..463 CDD:275368 3/15 (20%)
C2H2 Zn finger 476..505 CDD:275368 10/28 (36%)
C2H2 Zn finger 513..533 CDD:275368 4/19 (21%)
C2H2 Zn finger 545..565 CDD:275368 5/19 (26%)
C2H2 Zn finger 568..584 CDD:275368 2/4 (50%)
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 50/242 (21%)
C2H2 Zn finger 95..115 CDD:275368 5/21 (24%)
zf-H2C2_2 107..132 CDD:290200 9/74 (12%)
C2H2 Zn finger 123..144 CDD:275368 9/48 (19%)
C2H2 Zn finger 152..172 CDD:275368 10/19 (53%)
zf-H2C2_2 165..189 CDD:290200 8/28 (29%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
COG5048 <192..369 CDD:227381 49/205 (24%)
C2H2 Zn finger 210..230 CDD:275370 5/19 (26%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 4/19 (21%)
C2H2 Zn finger 295..315 CDD:275368 4/20 (20%)
zf-H2C2_2 309..332 CDD:290200 9/23 (39%)
C2H2 Zn finger 323..343 CDD:275368 10/28 (36%)
C2H2 Zn finger 351..374 CDD:275368 7/28 (25%)
C2H2 Zn finger 382..399 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446697
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.980

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