DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17612 and D19A

DIOPT Version :10

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster


Alignment Length:622 Identity:131/622 - (21%)
Similarity:216/622 - (34%) Gaps:172/622 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ENVCQCCKVRPGLSVKRGGSLPKTLCLQC------LH---------------------------M 33
            :.:|.|    ..|||::....||.||..|      ||                           .
  Fly    36 KKLCFC----TSLSVEQNDGFPKNLCTLCYTKLNELHDFQKQCVDSVQKFQDLVASNVFACQSSF 96

  Fly    34 DTFGTKHKGPRPETQINDKVHLEMSINGEDGLPEHPLYPEVQLVVKEEDALIKKKVIEENHIHNE 98
            |.|.       |...:.|....|......|.|..|    :::|:..|||..   |::|  |:..|
  Fly    97 DVFD-------PNVAVQDYPAEEEDHVNYDPLLNH----KMELIENEEDVF---KMLE--HVDKE 145

  Fly    99 EIIGASNI-VDVEVHENHRANNDVILIQDSFAEEVILEDHPANNDVIIIQDSVAEEELPVIKEEA 162
                |..: .:.:|.|:...|..|.:..|..:    :|....|:..:..:.:.:::::|      
  Fly   146 ----AEEVEKEAKVEEDDGGNVSVKMFDDDSS----IESGNDNDHDLDFEPNSSDDDIP------ 196

  Fly   163 IEGEDLQGEYFIITECLEEPAIGSCRVCLEQSDNLTNIFDDAHQYGIPIATILSQYTGMP----- 222
                        :.:.:..||.||.    .|.|..:|:  |..:         .:..|.|     
  Fly   197 ------------LAQRMRGPATGSG----PQQDRFSNL--DKPK---------PRPRGRPKKIKP 234

  Fly   223 -----VEKGDSFSEYICVTCLDVVKNAFDDLESKENTIQMYRQPKEEIIDIDSIPVKNKPVDYEV 282
                 .|..||.||             .||   .|:......:||.:     .||::.:.:    
  Fly   235 PPPEEEELSDSSSE-------------SDD---SEDGTSRGDKPKRK-----RIPIEERHL---- 274

  Fly   283 TGKPPHR---CPQCPKIFLLAAKLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHR 344
                 ||   |..|.:.|..|.:.:.|::.||:..   |.:.|...|...:.....|..|:    
  Fly   275 -----HRIIDCHICHQKFKKAIRYEEHMKYHNDLL---PFQCKVETCKKGFTTANGLRIHI---- 327

  Fly   345 ASDERESELEPPYRC--PHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSL 407
              |...:||...:.|  ..|.|.|.....|..|::....:::..:......|.:|..||...::|
  Fly   328 --DHAHTELSEVHACIAEGCGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTAL 390

  Fly   408 KDHVKIHAGER-TFKCPLCLMSFQEESNLKSHDCAHTRFK---CHKCSKFFESQNYLDFHFKKSH 468
            |.|:..|.||. .:.|.:|...|...|.|:.|...|...|   |..|.....::...:.|. .:|
  Fly   391 KKHMYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAHI-LTH 454

  Fly   469 TTKGPFKCIKCQQTFQKRNGLKEHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATH 533
            |.:..|||.:|......:..|..|      |:.:..|.  :.|.|..|.|.|......::|..:|
  Fly   455 TKEKKFKCRQCDHASHNKQALSNH------VKVVHEKR--KDFACQYCGKTFGKSHACKVHERSH 511

  Fly   534 KKVKTVIERHNCTQCK---KSYQNKKLLTKHILSHNR 567
            ...|       |.:||   |.:..:|.||||:.:|.:
  Fly   512 TGEK-------CCECKICGKIFLCEKSLTKHLKTHEK 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 11/68 (16%)
C2H2 Zn finger 290..310 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275370 3/19 (16%)
C2H2 Zn finger 359..379 CDD:275368 6/21 (29%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..438 CDD:275368 5/15 (33%)
C2H2 Zn finger 447..463 CDD:275368 2/15 (13%)
C2H2 Zn finger 476..505 CDD:275368 5/28 (18%)
C2H2 Zn finger 513..533 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368 9/22 (41%)
C2H2 Zn finger 568..584 CDD:275368 131/622 (21%)
D19ANP_477304.1 zf-AD 12..83 CDD:214871 12/50 (24%)
SFP1 <291..363 CDD:227516 17/80 (21%)
C2H2 Zn finger 343..362 CDD:275368 5/18 (28%)
C2H2 Zn finger 377..397 CDD:275368 7/19 (37%)
zf-H2C2_2 389..414 CDD:463886 8/24 (33%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..454 CDD:275368 3/20 (15%)
C2H2 Zn finger 462..483 CDD:275368 5/26 (19%)
C2H2 Zn finger 491..511 CDD:275368 5/19 (26%)
C2H2 Zn finger 519..539 CDD:275368 8/19 (42%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-C2H2 707..729 CDD:395048
C2H2 Zn finger 709..729 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.