DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and D19B

DIOPT Version :10

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:736 Identity:146/736 - (19%)
Similarity:224/736 - (30%) Gaps:265/736 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ENVCQCCKVRPGLSVKRGGSLPKTLCLQC------LH---------------------------- 32
            :.:|.|    ..|||::....||.||..|      ||                            
  Fly    36 KKLCVC----TSLSVEQADGFPKNLCNVCFSKLNDLHDFQKQCVDSVQKFQDLVASNAFACQTNF 96

  Fly    33 --MDTFGTKHKGPRPETQINDKVHLEMSINGEDGLPEHPLYPEVQLVVKEEDAL-----IKKKVI 90
              :||.......|..|   .|.||.:..:|.           :::::..|||..     ::|:| 
  Fly    97 DVLDTSAAVADLPGEE---EDNVHFDPLLNS-----------KIEIIENEEDVFKMLESVEKEV- 146

  Fly    91 EENHIHNEEIIGASNIVDVEVHENHRANNDVILIQDSFAEEVILEDHPANNDVIIIQDSVAEEEL 155
            ||..:..|:..|             |.:.|     |||...   .|:..:.|..|..|    :::
  Fly   147 EEVEMEMEQPFG-------------RVSQD-----DSFESG---NDNDLDADFQISSD----DDI 186

  Fly   156 PVIKEE---AIEGEDLQGEYFIITECLEEPAIGSCRVCLEQSDNLTNIFDDAHQYGIPIATILSQ 217
            |:.:..   |..|...:|:.....:..||.:        |:|:. |:..||:             
  Fly   187 PLAQRSRRGATRGSKAKGKPKSAAKRQEEES--------EESEE-TSSSDDS------------- 229

  Fly   218 YTGMPVEKGDSFSEYICVTCLDVVKNAFDDLESKENTIQMYRQPKEEIIDIDSIPVK-NKPVDYE 281
             .|.|.:|                        .|...|....:.:..:||......| .|.:.||
  Fly   230 -DGNPKDK------------------------PKRKRIPATERDRHRLIDCHICHQKFKKAIRYE 269

  Fly   282 VTGKP-----PHRC--PQCPKIFLLAAKLQAHI-RTHNETRTTEPPRLKCPM--CPSIYMKRGCL 336
            ...|.     |.:|  ..|.|.|..|..|:.|: ..|.||....|    |..  |...:.:...|
  Fly   270 EHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHP----CTYEGCNKSFARPVLL 330

  Fly   337 EAHMWIHRASDERESELEPPYR---CPHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCA 398
            ..||       :|..:::.|.|   |..|.|:|...:.|:.|:..|      ...:....|..|.
  Fly   331 SFHM-------KRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKH------TGEELPFACEICG 382

  Fly   399 DVFSDVSSLKDHVKIHAGERTFKCPLCLMSFQEESNLKSHDCAHT---RFKCHKCSKFFESQNYL 460
            ..|...|.|:||:..|||.:...||.|.:..........|...||   :::|.:|.....::..|
  Fly   383 KRFPINSVLRDHLLRHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQAL 447

  Fly   461 DFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEHISSQVCVQFLRSKSPGQIF-------------- 511
            ..|.|..|..:..|.|..|.:||.|.:..|.|..|....:....|..|::|              
  Fly   448 ANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGKVFLFEKGLTKHLKTHE 512

  Fly   512 ------------------------------------------------------------P---- 512
                                                                        |    
  Fly   513 KRDLPKTQGTNALMGDGASGSSTIAKPSPHLRGRVERVDIAQLAGTVANPIPSVNLPSWSPQVNF 577

  Fly   513 --------CPKCPKKFSIEDNYQMHH-ATHKKVKTVIERHNCTQCKKSYQNKKLLTKHILSHN-- 566
                    ||.|.|.|:...|.::|: ..|:|||...    |..|.|.:..|:.|..|...|.  
  Fly   578 TKKEGQHICPDCGKGFNHVSNMKLHYKVVHQKVKDFC----CRFCPKRFAKKQYLRHHEYIHTGE 638

  Fly   567 ---RCVHCSMSFTSKYLLEQH 584
               .|..|...|..:.:|:.|
  Fly   639 KPYECKVCGKHFRQEQVLKTH 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 8/58 (14%)
C2H2 Zn finger 290..310 CDD:275368 7/22 (32%)
C2H2 Zn finger 323..343 CDD:275370 5/21 (24%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..438 CDD:275368 3/15 (20%)
C2H2 Zn finger 447..463 CDD:275368 3/15 (20%)
C2H2 Zn finger 476..505 CDD:275368 8/28 (29%)
C2H2 Zn finger 513..533 CDD:275368 7/20 (35%)
C2H2 Zn finger 545..565 CDD:275368 6/19 (32%)
C2H2 Zn finger 568..584 CDD:275368 4/15 (27%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871 12/50 (24%)
C2H2 Zn finger 255..275 CDD:275368 5/19 (26%)
SFP1 <266..365 CDD:227516 28/109 (26%)
C2H2 Zn finger 283..335 CDD:275368 16/62 (26%)
C2H2 Zn finger 318..338 CDD:275368 5/26 (19%)
COG5048 <347..512 CDD:227381 41/170 (24%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 4/19 (21%)
C2H2 Zn finger 434..455 CDD:275368 5/20 (25%)
C2H2 Zn finger 463..483 CDD:275368 7/19 (37%)
C2H2 Zn finger 491..511 CDD:275368 3/19 (16%)
C2H2 Zn finger 586..607 CDD:275368 7/20 (35%)
C2H2 Zn finger 615..635 CDD:275368 6/19 (32%)
zf-H2C2_2 627..652 CDD:463886 6/24 (25%)
C2H2 Zn finger 643..663 CDD:275368 5/17 (29%)

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