DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and fezf-1

DIOPT Version :9

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_502594.2 Gene:fezf-1 / 3564888 WormBaseID:WBGene00012639 Length:218 Species:Caenorhabditis elegans


Alignment Length:177 Identity:54/177 - (30%)
Similarity:74/177 - (41%) Gaps:19/177 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 RLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLFLYSSFLEIHIQTHEDVSQ 384
            :..|.:|...:.....|..||.:|..        |.|:.|..|.|.|..:|.|..|...|.|   
 Worm    51 KFPCEICGKQFNAHYNLTRHMPVHTG--------ERPFVCKVCGKAFRQASTLCRHKIIHTD--- 104

  Fly   385 RLSRKSSHKCAQCADVFSDVSSLKDHVKIHAGERTFKCPLCLMSFQEESNLKSHDCAH---TRFK 446
                ...|||..|...|:..|:|..||:||.|.:.|.|.:|...|.:..|.|:|...|   .:|.
 Worm   105 ----SKPHKCKTCGKCFNRSSTLNTHVRIHQGFKPFVCEICGKGFHQNGNYKNHRLTHEDTKKFS 165

  Fly   447 CHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEHI 493
            |..||:.|.....|.||. .:|....||.|..|.:.|.:...||:|:
 Worm   166 CSICSRAFHQSYNLAFHM-FTHEEHKPFTCHVCSKGFCRNFDLKKHL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071
C2H2 Zn finger 290..310 CDD:275368
C2H2 Zn finger 323..343 CDD:275370 5/19 (26%)
zf-C2H2_8 356..438 CDD:292531 28/81 (35%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..438 CDD:275368 5/15 (33%)
C2H2 Zn finger 447..463 CDD:275368 5/15 (33%)
C2H2 Zn finger 476..505 CDD:275368 6/18 (33%)
C2H2 Zn finger 513..533 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 568..584 CDD:275368
fezf-1NP_502594.2 COG5048 <13..212 CDD:227381 54/177 (31%)
DUF3449 <50..>70 CDD:288759 3/18 (17%)
C2H2 Zn finger 54..74 CDD:275368 5/19 (26%)
zf-H2C2_2 66..91 CDD:290200 10/32 (31%)
C2H2 Zn finger 82..102 CDD:275368 7/19 (37%)
C2H2 Zn finger 110..130 CDD:275368 7/19 (37%)
C2H2 Zn finger 138..158 CDD:275368 6/19 (32%)
C2H2 Zn finger 166..186 CDD:275368 7/20 (35%)
C2H2 Zn finger 194..212 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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