DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and CG17328

DIOPT Version :9

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:409 Identity:90/409 - (22%)
Similarity:136/409 - (33%) Gaps:141/409 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 CRVCLEQSDNLTNIFDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDVVKNAFDDLESK 251
            ||||||:...:|:|:  :..:.:..:.:|.|...:.|.|.|.....||..|:..:..||...:..
  Fly     9 CRVCLEELHPVTSIY--STDFAMMPSVMLMQCAKIRVFKTDGLPSVICNNCIYRLGVAFHFKQEC 71

  Fly   252 ENT----------IQMYRQPKEEIIDIDSIPV-------KNKPVDYEVT---------------- 283
            ||:          ::.:||......|....|:       :.:|||.:|:                
  Fly    72 ENSDLRLRQYLGILESWRQDAATNTDFVEKPLLPQRDSDEEEPVDAKVSKRRSRYQRKPPEEHKK 136

  Fly   284 ------GKPPHRCPQCPKIFLLAAKLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWI 342
                  .|.||.|.:|.|.|...|:|..|||||..                              
  Fly   137 RGPKPVPKMPHTCYECHKSFKCIAQLTQHIRTHTG------------------------------ 171

  Fly   343 HRASDERESELEPPYRCPHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSL 407
                       |.||:|..|.:.|.....|::|.:||       :.....:|..|:..||.:.:.
  Fly   172 -----------EKPYQCSFCIQRFAQKYNLKVHERTH-------TGDKPFQCEICSKQFSALGNF 218

  Fly   408 KDHVKIHAGERTFKCPLCLMSFQEESNLKSHDCAHTRFKCHKCSKFFESQNYLDFHFKKSHTTKG 472
            :.|.|||.|.|...|.||...|....:|..|...||..|.|.|.                     
  Fly   219 QAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCD--------------------- 262

  Fly   473 PFKCIKCQQTFQKRNGLKEHISSQVCVQFLRSKSPGQI-----------------------FPCP 514
                 .|.:.|.:|..::.|   ::.:..|.|.:...|                       |.||
  Fly   263 -----VCGKAFSRRRDMRTH---KLKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTLDHAHFKCP 319

  Fly   515 KCPKKFSIEDNYQMHHATH 533
            .|.|.|...|:..:|..||
  Fly   320 DCDKAFDTADSLSLHFRTH 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 17/58 (29%)
C2H2 Zn finger 290..310 CDD:275368 9/19 (47%)
C2H2 Zn finger 323..343 CDD:275370 0/19 (0%)
zf-C2H2_8 356..438 CDD:292531 24/81 (30%)
C2H2 Zn finger 359..379 CDD:275368 5/19 (26%)
C2H2 Zn finger 394..414 CDD:275368 6/19 (32%)
C2H2 Zn finger 422..438 CDD:275368 5/15 (33%)
C2H2 Zn finger 447..463 CDD:275368 2/15 (13%)
C2H2 Zn finger 476..505 CDD:275368 5/28 (18%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 568..584 CDD:275368
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 20/72 (28%)
COG5048 146..>211 CDD:227381 25/112 (22%)
C2H2 Zn finger 149..169 CDD:275368 9/19 (47%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
zf-H2C2_2 189..213 CDD:404364 6/30 (20%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:404364 9/50 (18%)
C2H2 Zn finger 261..282 CDD:275368 5/49 (10%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449779
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.890

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