DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and prg

DIOPT Version :9

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:506 Identity:117/506 - (23%)
Similarity:186/506 - (36%) Gaps:130/506 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 EEPAIGSCRVCLEQSD-NLTNIFDDAHQY--GIPIATILSQYTGMPVEKGDSFSEYICVTCLDVV 241
            ::..:.:||:|...:| |..|||||..|:  .:.||.:......:..::.:..||.||..||:::
  Fly    10 QDQDVSTCRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEIL 74

  Fly   242 KNAFD---DLESKENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPPHRCPQ--C-------- 293
            :.||:   .::.:|.::|  .|.||.|.|    ..|::|   .:.|.|....|:  |        
  Fly    75 EEAFELRKGMQEREQSLQ--EQLKEMIKD----HPKHRP---GLNGNPGVFVPEEGCIIVEVDPE 130

  Fly   294 ------PKIFLL-----------------------------------------AAKLQAHIRTHN 311
                  .:.|.|                                         ||::.|.....|
  Fly   131 NLAESSEEEFALGSDGEYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAAQMAAQQSVAN 195

  Fly   312 ETRTTE--PPR-LKCPMCP-SIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLFLYSSFL 372
            ...|||  |.| ..|..|. ...:...|.|..:..|        :...||.|..|....:....|
  Fly   196 NANTTEARPKRAFLCQYCDLGFTLPAECQEHELAAH--------DPNAPYCCNFCNIKLVTRPAL 252

  Fly   373 EIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAGERTFKCPLCLMSFQEESNLKS 437
            ..||:|..|..:      .:.||.|...|...|.||.|..:|.|.|.|.|.:|..||...:||..
  Fly   253 ISHIKTLHDPDR------PYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTK 311

  Fly   438 HDCAHT---RFKCHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEH------- 492
            |...|:   .|.|.:|.:.|::...:..| .:||.....|:|.:|..:|.:|:.|..|       
  Fly   312 HMRIHSGVKPFVCQQCPRSFQTAVEMMRH-TRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRR 375

  Fly   493 -------------ISSQVCVQFLRSKSP-------GQIFPCPKCPKKFSIEDNYQMHHATHKKVK 537
                         :...:..|.|::|..       .:.:.|..|.:.|..|.:.|.|.|.|    
  Fly   376 DMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDLQRHQALH---- 436

  Fly   538 TVIERHNCTQCKKSYQNKKLLTKHIL-SHN---RCVHCSMSFTSKYLLEQH 584
             :.....|..|.:.:..::.|.:|.| :|.   .|..|.:||..:..||.|
  Fly   437 -MDSLFACKTCNQGFNRREQLQRHELEAHGPSFTCGICCISFLHQIELENH 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 20/61 (33%)
C2H2 Zn finger 290..310 CDD:275368 7/76 (9%)
C2H2 Zn finger 323..343 CDD:275370 4/20 (20%)
zf-C2H2_8 356..438 CDD:292531 27/81 (33%)
C2H2 Zn finger 359..379 CDD:275368 5/19 (26%)
C2H2 Zn finger 394..414 CDD:275368 8/19 (42%)
C2H2 Zn finger 422..438 CDD:275368 6/15 (40%)
C2H2 Zn finger 447..463 CDD:275368 3/15 (20%)
C2H2 Zn finger 476..505 CDD:275368 8/48 (17%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
C2H2 Zn finger 545..565 CDD:275368 5/20 (25%)
C2H2 Zn finger 568..584 CDD:275368 6/15 (40%)
prgNP_001260253.1 zf-AD 16..94 CDD:285071 23/79 (29%)
COG5048 <212..340 CDD:227381 37/141 (26%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
zf-H2C2_2 280..305 CDD:290200 11/24 (46%)
zf-C2H2 294..316 CDD:278523 8/21 (38%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-H2C2_2 308..331 CDD:290200 7/22 (32%)
C2H2 Zn finger 324..344 CDD:275368 4/20 (20%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..464 CDD:275368 5/20 (25%)
C2H2 Zn finger 470..490 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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