DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17612 and CG15436

DIOPT Version :9

Sequence 1:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:398 Identity:119/398 - (29%)
Similarity:178/398 - (44%) Gaps:81/398 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 CRVCLEQSDNLTNIFDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDVVKNAFDDLESK 251
            ||||::.|..|.||||...:..:.||.:::|.||..|::||.|||.||..|.:.||:|:...::.
  Fly     5 CRVCMDISGKLVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDVKSAYGIRQTC 69

  Fly   252 ENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVT----------------GKPPHR-----CPQCPK 295
            |.:.|.|.:.::|.|: |::....:..|:|::                ||...:     |.:|.|
  Fly    70 EESHQFYCRVRDEGIE-DALCALLEEEDWEISEDEDARIDSASAADDDGKSDSKKVAFECRECHK 133

  Fly   296 IFLLAAKLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCP 360
            .:........|:|||.:.::     ..||.|...:..|..|:|||..|.|:        .||.|.
  Fly   134 KYQRKGTFLRHMRTHMDGQS-----FPCPYCKRNFRLRVTLKAHMKTHNAA--------KPYECS 185

  Fly   361 HCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAGERTFKCPLC 425
            ||.|.|...|.|:.|.:||       :.:...||:||:..|...|.|:.|::.|..||.      
  Fly   186 HCAKTFAQQSTLQSHERTH-------TGERPFKCSQCSKTFIKSSDLRRHIRTHGSERP------ 237

  Fly   426 LMSFQEESNLKSHDCAHTRFKCHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLK 490
                               |||.||:|.|..:.:||.|| :|||.:.||||..|.:.|..:..||
  Fly   238 -------------------FKCSKCTKTFTRKFHLDNHF-RSHTGERPFKCSHCPKAFAMKQHLK 282

  Fly   491 EHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKKVKTVIERHNCTQCKKSYQNK 555
            :|         .|...|.:.|.|..|||.|.:....:.|...|...:|    ..|..|...|:.:
  Fly   283 QH---------SRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNAERT----FKCPHCASFYKQR 334

  Fly   556 KLLTKHIL 563
            |.|.:|||
  Fly   335 KTLARHIL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 27/58 (47%)
C2H2 Zn finger 290..310 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275370 8/19 (42%)
zf-C2H2_8 356..438 CDD:292531 23/81 (28%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..438 CDD:275368 0/15 (0%)
C2H2 Zn finger 447..463 CDD:275368 7/15 (47%)
C2H2 Zn finger 476..505 CDD:275368 7/28 (25%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 8/19 (42%)
C2H2 Zn finger 568..584 CDD:275368
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 30/72 (42%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 8/19 (42%)
COG5048 <180..341 CDD:227381 62/206 (30%)
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
zf-H2C2_2 197..219 CDD:290200 8/28 (29%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
zf-H2C2_2 224..249 CDD:290200 12/49 (24%)
C2H2 Zn finger 240..260 CDD:275368 9/20 (45%)
zf-H2C2_2 252..276 CDD:290200 12/24 (50%)
C2H2 Zn finger 268..288 CDD:275368 7/28 (25%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..341 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446544
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006715
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.990

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